Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03870 ATGGCTATTGAAATTGCATCTGTTGTCTCTAAGTTACAAATGCTATCCACGTCCGATCATGCCTCCATTGTTTCCATGAACTTGTTTGTGGCACTTCTATGTGCTTGTATTGTCCTTGGTCATCTTCTCGAGGAGAATCGTTGGATGAATGAATCCATCACTGCCCTTTTGATTGGTATTGCCACTGGTGTAGTCATTTTGCTGTTAAGTGGCGGAAAAAGCTCGCATATTCTTGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTTCCGCCTATAATATTCAATGCCGGGTTTCAGGTGAAAAAGAAGCAATTTTTCGTCAACTTCATGACTATCACGTCGTTTGGTGCTATTGGCACATTAATATCCTGTGTCGTCATAACTTTCGGTGCTACCCAAGCTTTTAAAATGATGGATATTGGGCCACTGGATATCGGCGATTACCTAGCTATTGGAGCAATATTTGCCGCGACAGATTCTGTTTGCACGTTGCAGGTGCTAAATCAGGATGAGACACCTTTGTTATACAGTCTTGTATTTGGGGAAGGTGTTGTGAACGATGCTACCTCAGTGGTGCTTTTCAATGCAATTCAAAGCTTTGATCTCGACCGACTTAATCCTTCAATTGCAGTCCACTTTTTGGGCAACTTCTTGTATTTGTTTATAGCAAGCACGCTCCTTGGTGTTTTGACAGGTCTGCTTAGTGCTTACGTTATCAAAAAGCTGTACATTGGCAGGCACTCTACAGATCGTGAGGTTGCTCTCATGATGCTAATGGCATACCTCTCCTATATGCTGGCTGAGTTATTCTATCTGAGTGGAATTCTCACGGTATTCTTTTGTGGTATTGTTATGTCTCATTATACTTGGCATAATGTGACCGAGAGTTCAAGAGTCACTACCAAGCATTCTTTTGCTACCTTGTCATTTGTTGCTGAGATCTTTATCTTCCTTTATGTTGGTATGGATGCCCTGGACATTGAAAAATGGAAGTTTGTTAGTGATAGTCCTGGAACATCTATAGCAACAAGTGCTGTATTGTTGGGTCTAATACTTCTTGGAAGAGCAGCATTCGTTTTCCCATTATCCTTTTTATCCAACTTGACAAAAAAATCGCAACATCAGAAGATATCCTTCAGACAACAAGTGATCATCTGGTGGGCTGGTCTTATGAGAGGCGCTGTTTCAATGGCCCTCGCGTATAATCAGTTCACTAGGTCGGGGCACACTCAACTGCGTAGCAATGCAATCATGATCACCAGCACCATCACTGTTGTCCTTTTCAGCACAGTGGTGTTTGGTTTGCTGACTAAGCCACTTATAAGGCTTCTACTACCTCATCAGAAAGCCACAAACAGCATGACAACCACAGAATCATCTACTCCAAAATCGGTCATTGTCCCACTTCTAGGAGAGCCCCGAGATTCTGAAGCTGATCTTGAAGGCCATGAAATACACCGTCCAAACAGCATCCGTGCCTTACTTTCCACTCCAACTCACACTGTTCATCGACTATGGAGAAAGTTTGACGATTCATTCATGCGTCCTGTATTTGGTGGCAGGGGTTTTGTTCCTGTAGAACCCGGCTCACCAACTGAACGCAATGGTAATTTATGGCGTTAA 1626 0.4262 MAIEIASVVSKLQMLSTSDHASIVSMNLFVALLCACIVLGHLLEENRWMNESITALLIGIATGVVILLLSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTITSFGAIGTLISCVVITFGATQAFKMMDIGPLDIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLDRLNPSIAVHFLGNFLYLFIASTLLGVLTGLLSAYVIKKLYIGRHSTDREVALMMLMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHSFATLSFVAEIFIFLYVGMDALDIEKWKFVSDSPGTSIATSAVLLGLILLGRAAFVFPLSFLSNLTKKSQHQKISFRQQVIIWWAGLMRGAVSMALAYNQFTRSGHTQLRSNAIMITSTITVVLFSTVVFGLLTKPLIRLLLPHQKATNSMTTTESSTPKSVIVPLLGEPRDSEADLEGHEIHRPNSIRALLSTPTHTVHRLWRKFDDSFMRPVFGGRGFVPVEPGSPTERNGNLWR 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03870 541 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre2g03870 541 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre2g03870 541 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre2g03870 541 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trre2g03870 541 Gene3D - 146 197 - -
Trre2g03870 541 PANTHER SODIUM/HYDROGEN EXCHANGER 17 519 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trre2g03870 541 Pfam Sodium/hydrogen exchanger family 29 442 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03870 Trre-Chr2 44724818 44728944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03870 6 538 Antiporters AT3G05030 78.771 0.0 866
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03870 - - gmx:732573 919.457