Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03861 ATGAAGAACATCTTCAAGAAGCTTCATATAGGTAGCAGCCATGATCCTCCTCATCGATCCAATGAAACTCCGCCACCTGTACCATCGCCGTCTTGTGCCGCCGAAGATGTTCAGAGTTCCGCTACTTCTACAGTAACTCCAACTTCCTCATCGCCGTCTACAGCACCGGTTCCTGCTGCTTTCTCCGGTGGCGGCGGTGTGTCTGCGGTGGTCAATCGGCAAGATTTTTTCTCGTCGGAAGAGGAATTTCAGGTGCAGCTTGCCCTAGCTATCAGTGCTTCAAATTCGGATTTTCGTAGTGATGATCCGGAGAAGGATCAGATCCATGCCGCAACGCTGCTCAGTTTGGGAGGACATCGGATTGATTCGACCGGGAATAAAGATGATGTGGCGGAGGCGCTTTCGAGGCAGTATTGGGAATACAATGTGCTTGACTATGAGGAGAAAGTAGTAGATGGTTTTTATGATGTATATGGACTTTACAATGACCCGGCAATGCAAGGAAAGATGCCATCTCTAGCAGATCTTGAAACAAATCCTGGCAGTTCTAGCTTTGAAGTGGTCATAGTTAATCGAACAATTGATCCAGCCCTTGAAGAGCTGGTGCAAATTGCACAATGTATATCATTGGACTGCCCTGTCACCGAGATTGGTATTTTGGTACAAAGGCTTGCCGAACTTGTTACTAGCCATATGGGGGGCCCTGTAAAGGATGCTAATATTATATTAGCAAGATGGACAGAAAGAAGTACAGAGTTAAGGACATCTCTTCACACAAGTGTATTACCGCTTGGGTCCTTAGATATTGGGCTCTCTAGGCATCGCGCTTTACTTTTCAAGATATTAGCAGACAACATTAAGATGCCTTGTAGACTGGTTAAAGGTAGTCATTACACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTAGTTGATCTCATGGCTGCTCCTGGAACACTCATCCCAGCTGATATTTTAAATGCAAAGGATAGCGCCTTTAAGTCTTACAACCCCAAGATTGTGCCGAGTTTTCCTTCTGCTGAGGAAACTGAGCCTTCTTACTCAAGACCTATTCCACCATCTAATGGTGAAGGTAGTAGTCGGACTTCTGTGATAAAAGGTAATGCGCTGCCTTGGAATGGAAAATCATATACCGAGAAGTTCGAGTATATGCCTTCAAACTTTGGTTTGAACAGAGACACTGGCGTTGGTCCTTCTAAAATTCCTAATAGAGGGAGTCCTAACCAACGGGAAAATTTGCCACCGTCATATGGTAATTCTTTGTACAAAGGTACTCTTGGAATGAATGCAGTTGGTGATGGGACAAGATTGAATGTCAATGTTGTGCCATATCCCCAAAACAACCCCAACGACCCTCAGAACCTTTTTGCAGAACTGAACCCATTCTTGATAAAAGGGACTGGGAAGCCTTCTGTGCATAACAAACCTGTGGAAAATAAACCTCCTGAGCACGGTATAAAAAACAAAAATGTTTCTGGTAGACCTGTCTCACCACTGATGTGGAAGAATCAGCATGCTTACAACGAAGTCCCCAGGAAAAATAATCATAACCCTAATGAATATAACCCTCCTTTATTTGCTCCCAATATTTCTTCCAGATCTGAAAATACTGATCTCGGCACTTCCAATTCATCATACAATTCAAATATAAACAATGATATTAGTTCTCAAACTTTGGCACGAATTACTGGTTCAGTCTCACCAGCTGGTGTAGGTGAACTGAACCGGACTGAGGGTCTCGATGCTAATTTTAAAAGGGGTGATTTGGGAAGTTCTCAAAATGTCATGGTTAATGAACCCGAAAACAATGAACTTGGCCATCATGACAGGAGGAAGTGCATATATGACAGATTCATGGGAAGCAATTTGGAATTAAAAGATTCAGATAGTCCTAGCTCTTCAATTGATTACATTACAAATAGGGTTGATCAAATATTGGACGATGCAGATGTTGGTGAATGTGAGATTCCATGGGAGGATCTGGTTATTGGTGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATACCGTGCAGACTGGAATGGCACAGAGGTTGCTGTGAAGAAATTTTTGGATCAGGATTTTTCAGGTGCCGCCTTGTCTGAATTCAAAAGAGAAGTACGGATAATGCGTAGGCTGCGTCATCCAAACGTTGTTCTTTTTATGGGTGCTGTCACCCGGCCTCCTAATCTCTCGATCATTTCAGAGTTTCTCCCGAGAGGAAGCTTGTACCGAATTCTTCACCGCCCTAATTGTCAGATCGACGAGAAACAAAGAATAAAAATGGCTCTGGATGTGGCTAGGGGTATGAATTGCTTGCACGCCAGCACACCTACTATTGTTCACAGAGATCTGAAGTCCCCGAATCTTTTGGTTGATAAGAACTGGAATGTTAAGGTATGCGATTTTGGGTTGTCAAGGTTGAAGCATAACACATTTTTATCATCCAAATCAACTGCTGGAACGCCGGAATGGATGGCTCCTGAAGTTCTCCGTAATGAGCCTTCAAATGAGAAGTGTGATATTTATAGTTTTGGTGTCATCCTATGGGAGCTTGCCACTTTAAGGTTGCCATGGAGTGGGATGAATCCTATGCAAGTTGTTGGTGCTGTAGGTTTCCAAAACCGTCGCCTTGAAATTCCTAAGGAAGTTGATCCATTAGTTGCAAGAATAATCTGGGAATGTTGGCAACAGGATCCAAATTTGCGCCCCTCGTTTGCACAGCTCACAGTGGCTCTAAAGCCCTTGCAACGTCTGGTTATCCCATCTTATCAAGACATGGTAGCTTCACCTCTGCCTCAGGAGATTTCTGTAAATTCTACCCCATGA 2874 0.4353 MKNIFKKLHIGSSHDPPHRSNETPPPVPSPSCAAEDVQSSATSTVTPTSSSPSTAPVPAAFSGGGGVSAVVNRQDFFSSEEEFQVQLALAISASNSDFRSDDPEKDQIHAATLLSLGGHRIDSTGNKDDVAEALSRQYWEYNVLDYEEKVVDGFYDVYGLYNDPAMQGKMPSLADLETNPGSSSFEVVIVNRTIDPALEELVQIAQCISLDCPVTEIGILVQRLAELVTSHMGGPVKDANIILARWTERSTELRTSLHTSVLPLGSLDIGLSRHRALLFKILADNIKMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPADILNAKDSAFKSYNPKIVPSFPSAEETEPSYSRPIPPSNGEGSSRTSVIKGNALPWNGKSYTEKFEYMPSNFGLNRDTGVGPSKIPNRGSPNQRENLPPSYGNSLYKGTLGMNAVGDGTRLNVNVVPYPQNNPNDPQNLFAELNPFLIKGTGKPSVHNKPVENKPPEHGIKNKNVSGRPVSPLMWKNQHAYNEVPRKNNHNPNEYNPPLFAPNISSRSENTDLGTSNSSYNSNINNDISSQTLARITGSVSPAGVGELNRTEGLDANFKRGDLGSSQNVMVNEPENNELGHHDRRKCIYDRFMGSNLELKDSDSPSSSIDYITNRVDQILDDADVGECEIPWEDLVIGERIGLGSYGEVYRADWNGTEVAVKKFLDQDFSGAALSEFKREVRIMRRLRHPNVVLFMGAVTRPPNLSIISEFLPRGSLYRILHRPNCQIDEKQRIKMALDVARGMNCLHASTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTAGTPEWMAPEVLRNEPSNEKCDIYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPLVARIIWECWQQDPNLRPSFAQLTVALKPLQRLVIPSYQDMVASPLPQEISVNSTP 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03861 957 FunFam Serine/threonine-protein kinase isoform 1 667 754 - -
Trre2g03861 957 MobiDBLite consensus disorder prediction 411 430 - -
Trre2g03861 957 CDD STKc_MAP3K-like 682 925 - -
Trre2g03861 957 MobiDBLite consensus disorder prediction 350 379 - -
Trre2g03861 957 PRINTS Tyrosine kinase catalytic domain signature 855 877 IPR001245 GO:0004672|GO:0006468
Trre2g03861 957 PRINTS Tyrosine kinase catalytic domain signature 836 846 IPR001245 GO:0004672|GO:0006468
Trre2g03861 957 PRINTS Tyrosine kinase catalytic domain signature 899 921 IPR001245 GO:0004672|GO:0006468
Trre2g03861 957 PRINTS Tyrosine kinase catalytic domain signature 750 763 IPR001245 GO:0004672|GO:0006468
Trre2g03861 957 PRINTS Tyrosine kinase catalytic domain signature 789 807 IPR001245 GO:0004672|GO:0006468
Trre2g03861 957 MobiDBLite consensus disorder prediction 540 559 - -
Trre2g03861 957 Gene3D Transferase(Phosphotransferase) domain 1 755 937 - -
Trre2g03861 957 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 74 931 - -
Trre2g03861 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 795 807 IPR008271 GO:0004672|GO:0006468
Trre2g03861 957 MobiDBLite consensus disorder prediction 599 619 - -
Trre2g03861 957 MobiDBLite consensus disorder prediction 1 59 - -
Trre2g03861 957 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Trre2g03861 957 FunFam PAS domain-containing protein tyrosine kinase family protein 754 944 - -
Trre2g03861 957 MobiDBLite consensus disorder prediction 416 430 - -
Trre2g03861 957 ProSiteProfiles Protein kinase domain profile. 676 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03861 957 MobiDBLite consensus disorder prediction 484 512 - -
Trre2g03861 957 SUPERFAMILY Protein kinase-like (PK-like) 667 948 IPR011009 -
Trre2g03861 957 MobiDBLite consensus disorder prediction 363 379 - -
Trre2g03861 957 Pfam Ethylene-responsive protein kinase Le-CTR1 131 329 - -
Trre2g03861 957 Pfam Protein tyrosine and serine/threonine kinase 677 926 IPR001245 GO:0004672|GO:0006468
Trre2g03861 957 Gene3D Phosphorylase Kinase; domain 1 669 753 - -
Trre2g03861 957 MobiDBLite consensus disorder prediction 33 57 - -
Trre2g03861 957 SMART serkin_6 676 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03861 Trre-Chr2 44518830 44527141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03861 1 912 MAP Kinase Kinase Kinase AT1G08720 55.591 0.0 934
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Trre2g03861 PK_Tyr_Ser-Thr 7.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03861 - - aprc:113870732 1535.01