Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03848 ATGGCCTTTTCTCAACAAGTTCAATCCTCATCTCCTATTGTTTTCCCCGTCCGAAGGCGTCAACCGGAGCTCATTGCTCCGGCTACGCCCACATCCCACGAAACTAAGCAACTATCCGATATAGATGAACAAGCCGGTCTTCGCGCCAATATACCAATCATACAATTCTATCGTAACGAGCCATCAATGTCGGGGAAAGACCCGGTTGAAGTCATAAGAAATGCAATTGCACAAGCACTTGTGTTTTACTATCCACTGGCTGGTAGACTTAAGGAAGCTGGTGGTAAACTTGTGGTGGATTGTAATGAAGAAGGTGTGATGTTCATTGAGGCTGAGGCTGAGGCTGAGGCTGATGCTGATGTTACATTTGAACAATTTGGTGAAATTAAACCATATATAGAATACATTTTTCACATTAATTAG 423 0.4326 MAFSQQVQSSSPIVFPVRRRQPELIAPATPTSHETKQLSDIDEQAGLRANIPIIQFYRNEPSMSGKDPVEVIRNAIAQALVFYYPLAGRLKEAGGKLVVDCNEEGVMFIEAEAEAEADADVTFEQFGEIKPYIEYIFHIN 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03848 140 Gene3D - 16 138 IPR023213 -
Trre2g03848 140 Pfam Transferase family 17 116 - -
Trre2g03848 140 PANTHER ACYL TRANSFERASE 4 15 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03848 Trre-Chr2 44363066 44363488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03848 20 131 Monolignol Biosynthesis Gene Families AT5G48930 33.628 1.43e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03848 K19861 - gmx:100820325 174.866