Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03815 ATGGCTGATTCTTCAACAAACCCAAAGGATCACCAAAATACACGTCTCTATCATCCTTACCAACACCTCAACATCCCCGTCGATAAACTCTACAACCTCCCTACCTCACCAGAACATCTTTTCCCCGAAGAAGCTTCTAGAAAGCACCGATCATGGGGCGACAATCTCCAGTACTACACCGGCACCGGCTACCTCTCCGGCGCTATCATCGGAGGTGCTAAGGGAACCGTAGAAGGTCTCAAAGCTGCTGAGTCCGGATTGGAGAGTAGTATGATCCACTTTAGAGATACGGATGATTTTGTCAATAGTGCCGTCGCCGGACTTGGTACCGGAGCGCTTTATAAGGCTGCCACTGGCCCCCGATCGGCTGCTATTGCTGGTGCTATCGGGGGAATTGCGGCGGCTGTGGCAGTTGTTGGGAAACAGGCTTTGAAACGACACATTCCGATATAA 453 0.5121 MADSSTNPKDHQNTRLYHPYQHLNIPVDKLYNLPTSPEHLFPEEASRKHRSWGDNLQYYTGTGYLSGAIIGGAKGTVEGLKAAESGLESSMIHFRDTDDFVNSAVAGLGTGALYKAATGPRSAAIAGAIGGIAAAVAVVGKQALKRHIPI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03815 150 PANTHER TIM23 85 138 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03815 Trre-Chr2 44042882 44043436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03815 1 150 Chloroplast and Mitochondria Gene Families AT3G04800 42.553 6.30e-39 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03815 K17794 - gmx:100803835 212.616