Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03814 ATGTTTGATGGAGTCCCAGACCAATTCCACCAATTCATAACTCCAAGAACATCATCATCATCATCATTACCACTTCATTTACCTTTCCCTCTTTCAACACCAAATAATAACACTTTTCCTACTTTTGATCCTTATAATCAACAATTACCACTCCAAGTTCAACCAAATAATCTTTTGCACCCATTACACCATCACAAAGATGATGAACACAAGCCACAAAACAATACTACTTCTACTACTATTCCTCCTTCAATGAATAACTTCCAAATTGATAGAGATCAAAGACAAATTCTACCTCAACTCATTGATCCTTGGACTAATGATGAAGTTCTTGCTCTTTTGAAGATCAGATCTAGCATGGAAAATTGGTTCCCAGATTTCACTTGGGAACATGTCTCAAGGAAGCTAGCAGAAGTAGGATATAAACGTAGTGCAGAAAAATGCAAGGAGAAATTTGAAGAAGAAAGTAGATTCTTCAACAACATTAATAATAATAATAATCAAAATCAAAATCAGAATAATTTCGGTAAGAATTTCCGGTTTGTTACGGAGCTTGAAGAGCTTTATCAAGGTAGTGGTGAGAATAATAATAATCAAGTTGAGACTCAGAAGCCAAATATCGTACAAGACAAAATGGACCAGAGTGAGGATTCAAGAAACGAAGATGTTTTGGTGACGAAGAAAAGCGAAGATGAGGTGTTTGAGAAAAGTACTACAAATGAAGAGAGGAAGAGGAAGAGAGGTGATAATAGATTTGAAGTGTTTAAAGGTTTTTGTGAGAGTGTTGTGAAGAAAATGATGGATCAACAAGAGGAAATGCACAATAAGCTTATTGAAGATATGATTAAAAGAGATGAAGAGAAATTTGTTAGAGAAGAAGCTAGGAAGAAACAAGAGATGGAGAAGATGAACAAAGAGCTTGAGTTAATGGCACAAGAACAAGCTATTGCTGGTGATAGACAAGCCAATATAATTCAATTCTTGAACAAATTCTCTACTAGTACTAATTCTTCTAGTTCTCTAGCTTTAATTGCAACTTCAATTCAAAGCTTTGGAATTGGAAAAGAAGACAAATCTAAGGTAACATCTAATTCTTCTACATTGCACTCACAAAACCCTAATCTTGAAAATCATGAAAAAACTCTTCAACCAACACCTGAAAACCCTAGCTCAGGCAATCCTTCTTCGACTACTACTTTGGCGGTTACGCCACACAAGAACAACGCTATTTCTTCTTCTTCGTATAATGTTATATCTAGCGGCGGTGAGAAAGAGGATATAGGGAGAAGATGGCCAAAAGATGAAGTGTTGGCATTGATAAACTTGAGGTGCAATAACAACAATGAAGAAAAGGAAGGAAACAACATCAACAATAAGGCACCACTTTGGGAGAGAATATCACAAGGGATGTTGGAGTTAGGATACAAGAGAAGTGCAAAAAGATGCAAAGAGAAATGGGAGAATATAAACAAGTACTTTAGAAAAACAAAAGATGCTAATAGGAAAAGGTCACTTGATTCAAGAACATGTCCTTATTTTCATCTATTGAGTAATCTTTATAACCAAGGTAAACTTGTTCTTCAATCTGAACAAAAGCAAGAAAGCAATAACATGAATGTGGCAGAAGAAAATGTTCAAGAACAAGCTCCACAAGATGAAAAACAAGGTGGTGGTGGTGAGTCTTCTCAAGTGGGACCTGCATATGCTGGTGATTTTACTATGTAA 1725 0.3559 MFDGVPDQFHQFITPRTSSSSSLPLHLPFPLSTPNNNTFPTFDPYNQQLPLQVQPNNLLHPLHHHKDDEHKPQNNTTSTTIPPSMNNFQIDRDQRQILPQLIDPWTNDEVLALLKIRSSMENWFPDFTWEHVSRKLAEVGYKRSAEKCKEKFEEESRFFNNINNNNNQNQNQNNFGKNFRFVTELEELYQGSGENNNNQVETQKPNIVQDKMDQSEDSRNEDVLVTKKSEDEVFEKSTTNEERKRKRGDNRFEVFKGFCESVVKKMMDQQEEMHNKLIEDMIKRDEEKFVREEARKKQEMEKMNKELELMAQEQAIAGDRQANIIQFLNKFSTSTNSSSSLALIATSIQSFGIGKEDKSKVTSNSSTLHSQNPNLENHEKTLQPTPENPSSGNPSSTTTLAVTPHKNNAISSSSYNVISSGGEKEDIGRRWPKDEVLALINLRCNNNNEEKEGNNINNKAPLWERISQGMLELGYKRSAKRCKEKWENINKYFRKTKDANRKRSLDSRTCPYFHLLSNLYNQGKLVLQSEQKQESNNMNVAEENVQEQAPQDEKQGGGGESSQVGPAYAGDFTM 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03814 574 MobiDBLite consensus disorder prediction 529 546 - -
Trre2g03814 574 ProSiteProfiles Myb-like domain profile. 104 156 IPR001005 -
Trre2g03814 574 Coils Coil 282 317 - -
Trre2g03814 574 MobiDBLite consensus disorder prediction 354 426 - -
Trre2g03814 574 MobiDBLite consensus disorder prediction 210 246 - -
Trre2g03814 574 FunFam Trihelix transcription factor GT-2 431 495 - -
Trre2g03814 574 Pfam Myb/SANT-like DNA-binding domain 103 186 IPR044822 -
Trre2g03814 574 Pfam Myb/SANT-like DNA-binding domain 429 517 IPR044822 -
Trre2g03814 574 MobiDBLite consensus disorder prediction 59 85 - -
Trre2g03814 574 ProSiteProfiles Myb-like domain profile. 430 490 IPR001005 -
Trre2g03814 574 PANTHER FI21293P1 64 555 - -
Trre2g03814 574 MobiDBLite consensus disorder prediction 529 574 - -
Trre2g03814 574 CDD GT1 429 497 - -
Trre2g03814 574 MobiDBLite consensus disorder prediction 191 209 - -
Trre2g03814 574 FunFam Trihelix transcription factor GT-2 105 161 - -
Trre2g03814 574 Gene3D - 105 160 - -
Trre2g03814 574 Gene3D - 431 495 - -
Trre2g03814 574 MobiDBLite consensus disorder prediction 191 246 - -
Trre2g03814 574 MobiDBLite consensus disorder prediction 354 420 - -
Trre2g03814 574 SMART sant 427 492 IPR001005 -
Trre2g03814 574 SMART sant 101 158 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03814 Trre-Chr2 44020342 44022602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03814 1 522 Trihelix Transcription Factor Family AT5G28300 41.275 1.05e-100 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trre2g03814 Myb_DNA-bind_4 5.1e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03814 - - tpra:123903108 924.465