Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03777 ATGTTGGCCGACCAGATGCTTTCGAGAATAGAATACATGCATTCCAAGGGATTTTTGCATAGAGACATAAAACCAGATAACTTTCTAATGGGTATTAGGAGGAAATCAAGTCAGGTTTATATTACTGATTTCGGACTAGGAAAAAGATATAAGGATCCCAAAACAAACAAGCATATTCCTTACAGAGAGAATAAAAATTTAACCGGGACAACACGATACGCAAGTTGCAATACTCACTTAGGAATTGAACAAAGTCGTCGTGATGATTTGGAGTGTATTGGCTATGTTCTTATGTACTTCTTAAGAGGAAGCCTTCCTTGGCAGGGTCTGAAAGCTGTCACCAAAGAGTAA 351 0.3818 MLADQMLSRIEYMHSKGFLHRDIKPDNFLMGIRRKSSQVYITDFGLGKRYKDPKTNKHIPYRENKNLTGTTRYASCNTHLGIEQSRRDDLECIGYVLMYFLRGSLPWQGLKAVTKE 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03777 116 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Trre2g03777 116 SUPERFAMILY Protein kinase-like (PK-like) 2 113 IPR011009 -
Trre2g03777 116 ProSiteProfiles Protein kinase domain profile. 1 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03777 116 Pfam Protein kinase domain 3 109 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03777 116 PANTHER CASEIN KINASE-RELATED 1 115 - -
Trre2g03777 116 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03777 Trre-Chr2 43187061 43200914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03777 5 116 AGC Kinase Gene Family AT3G08720 30.357 1.03e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Trre2g03777 Pkinase 4.5e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03777 K08960 - gmx:100792736 214.927