LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre2g03757	ATGTGTGTACCAATTTTGTTGAATGCACAAAGCAACAAAGATGAATCTTTCATATTAGGATGTGGCTTAGGTGAAAATGGTGGCAAAGATTCAGATGGAAGACAATGGATTCCAGATAACAAATATGTATCAGGTGGAAATTCAGTAACAGCAAAAGCTTCATTTCAAGACCCTTCACTTTTATCAGAAATTCCATATATGACAGCAAGAATTTTCACATCTGAAACAACCTACAAATTGCCGATTCTACCCGATAAACGTTATTGGTTAAGACTTCATTTTTATCCTTCTGTTTACAACAATTTCAACCCAGCAGATTCATATTTCTCTGTAACAGCAAATGGTGTTACACTTCTCAATAATTTCAGCTCCTCAATTACATGTCAAGCCTTATCACAAGCTTATATTGATAGAGAATATTCATTTGCACCTTTGAATTCGGATGTTCTTGAACTTACATTCAAACCTTCTGATAAACACAATGGTGCTTTTGCTTTTGTTAATGGTATTCAGCTTATTCAAATGCCGGATTTGCTATTTGATTCGCCTTTGTTGGTCGGTTATCCAGACCAAACTGTGGATGCTAAAAGTATGCATATGCAAACCATGTTTAGATTAAATGTTGGTGGGCAATATATATCTCCGGTTCATGATTCTGGTTTGAGTCGAACATGGTACGATGATACACCTTACATTTATGGTGCAGCCGTTGGTGTTACACATCAAGCTGAGAAGAATGTTACAATTGACTATCAAGCAATGCCTAAATACATTGCTCCTGCCGATGTTTATTCAACTTCAAGATCCATGGGAACTAATAAAGATGTCAACATGGGATACAATCTCACATGGATTTTTCAAGTTGATCCAAATTCTATGTACCTTACAAGATTACATTTTTGTGATTACCATTATTTGCAATCGAACGAGATTGTTTTCAGTATCTTTGTTAACAATCAAACAGCGCAGGATCAAGCTGATGTGATCGGTTGGACAGGAAGACAAGGAGTGACAACTTATAAGGATTATGTTGTTTATGTTCATGAAGAGGCGGGTGCTGATCAACTTTGGCTTGCATTGCATCCAAATCCCAATACAATGCCAAGATTTTACGATGCTATGCTTAATGGTGTTGAGATATTCAAACTCAATGATACTGATTTATCTGGACCAAATCCTCAACCTTCTGATATGATGATGGAGTATGAGGAGAAGATAAGAAACTTCGAAGACAAAAATAGTCATAGTAAGAGTTTTGCTATTGGTGGAGCTGCCGGAGGTGCTGCAGGTTTTGCATTAGTTGCTGCAATATGTATTGTTGTTCATCAAAGGAAGAAGAGAACACCAGGTTCATACACAAACACTACATCAAGTTGGTTACCTCTCTATGGAAATTCACACACAACCGGAACGAAATCCACAATATCAGGAAAAAGCACGATGGGTAGTGGTGCAAAGTTAGCCATGGCTGAAGGACTATGTCGATATTTCTCTTTACAAGAGATGAGGCAAGCAACCAATAATTTTGAAGAGTCTAATGTTATTGGTGTAGGAGGATTTGGAAAAGTTTACAAGGGTGTTATTGATAATGGTTTTAAAGTGGCTATTAAGAGATCAAATCCACAATCAGAACAAGGAGTGAATGAATTTCAGACGGAAATTGAGATGCTTTCAAAGCTTAGACATAAACATTTGGTGTCTTTAATTGGTTTTTGTGAGGAAGATGAGGAAATGTGTTTGGTCTATGATTACATGGCCCATGGAACCATGAGGGAGCATTTATACAAAGGAAACAAACCAATAGATACATTATCATGGAAACAAAGGTTAGAGATTTGTATCGGTGCCGCAAGAGGTCTTCATTACCTTCACACAGGAGCAAAGTACACTATAATTCATAGAGATGTCAAAACAACCAACATTTTGCTTGATGAAAATTTTGTTGCCAAGGTTTCAGATTTTGGTTTGTCAAAAACAGGTCCAAATATGAACCAGGGTCATGTTAGTACAGTGGTAAAAGGAAGTTTTGGTTATTTGGATCCTGAATATTTCAGGAGACAACAATTGACTGAAAAATCCGATGTGTACTCTTTTGGGGTTGTTCTATTCGAGGCACTGTGTTCAAGACCTGCTTTAAATCCTAGTCTTCCAAAGGAACAAGTTAGTCTTGCAGATTGGGCTTTGATCAACAAAAGAAAAGGAACATTAGAGGATATTATTGATCCAAATCTCAAAGGAAAAATCAAACCTGAAAGCTTGAAGAAATTTGCAGATACAGCTGAAAAGTGTTTGTCTGATTCTGGACTTGATCGTCCCTCGATGAATGATCTATTGTGGAATCTTGAATTTGCTCTCAACCTACAAGAAAACGATGGTACTTCAAGTTCAACTCATAACAACTCTACACATTTTGATGAGAGTGAATTTGAAGAGGTGAGTTTGGCACAAAATAATAACATGGCAGCACATTACAAAAACCTTAGCCTTGGAAGTGAACATGACCTTAGTCATGACACAACTGAGAATTCTTCTGACATTTTCTCTCAAATTGTCAATCCGAAAGGGCGATGA	2571	0.3703	MCVPILLNAQSNKDESFILGCGLGENGGKDSDGRQWIPDNKYVSGGNSVTAKASFQDPSLLSEIPYMTARIFTSETTYKLPILPDKRYWLRLHFYPSVYNNFNPADSYFSVTANGVTLLNNFSSSITCQALSQAYIDREYSFAPLNSDVLELTFKPSDKHNGAFAFVNGIQLIQMPDLLFDSPLLVGYPDQTVDAKSMHMQTMFRLNVGGQYISPVHDSGLSRTWYDDTPYIYGAAVGVTHQAEKNVTIDYQAMPKYIAPADVYSTSRSMGTNKDVNMGYNLTWIFQVDPNSMYLTRLHFCDYHYLQSNEIVFSIFVNNQTAQDQADVIGWTGRQGVTTYKDYVVYVHEEAGADQLWLALHPNPNTMPRFYDAMLNGVEIFKLNDTDLSGPNPQPSDMMMEYEEKIRNFEDKNSHSKSFAIGGAAGGAAGFALVAAICIVVHQRKKRTPGSYTNTTSSWLPLYGNSHTTGTKSTISGKSTMGSGAKLAMAEGLCRYFSLQEMRQATNNFEESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEEDEEMCLVYDYMAHGTMREHLYKGNKPIDTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENFVAKVSDFGLSKTGPNMNQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCSRPALNPSLPKEQVSLADWALINKRKGTLEDIIDPNLKGKIKPESLKKFADTAEKCLSDSGLDRPSMNDLLWNLEFALNLQENDGTSSSTHNNSTHFDESEFEEVSLAQNNNMAAHYKNLSLGSEHDLSHDTTENSSDIFSQIVNPKGR	856

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre2g03757	856	Gene3D	Transferase(Phosphotransferase) domain 1	585	809	-	-
	Trre2g03757	856	FunFam	FERONIA receptor-like kinase	198	384	-	-
	Trre2g03757	856	FunFam	receptor-like protein kinase FERONIA	471	584	-	-
	Trre2g03757	856	Gene3D	-	18	176	-	-
	Trre2g03757	856	Gene3D	-	198	384	-	-
	Trre2g03757	856	PANTHER	OS07G0166700 PROTEIN	494	788	IPR045272	GO:0004714\|GO:0006468
	Trre2g03757	856	ProSitePatterns	Protein kinases ATP-binding region signature.	515	537	IPR017441	GO:0005524
	Trre2g03757	856	Gene3D	Phosphorylase Kinase; domain 1	471	584	-	-
	Trre2g03757	856	CDD	STKc_IRAK	515	782	-	-
	Trre2g03757	856	SMART	serkin_6	509	784	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre2g03757	856	Pfam	Protein tyrosine and serine/threonine kinase	512	778	IPR001245	GO:0004672\|GO:0006468
	Trre2g03757	856	SUPERFAMILY	Protein kinase-like (PK-like)	490	784	IPR011009	-
	Trre2g03757	856	Pfam	Malectin-like domain	20	382	IPR024788	-
	Trre2g03757	856	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	631	643	IPR008271	GO:0004672\|GO:0006468
	Trre2g03757	856	FunFam	FERONIA receptor-like kinase	16	176	-	-
	Trre2g03757	856	ProSiteProfiles	Protein kinase domain profile.	509	784	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Trre2g03757	856	MobiDBLite	consensus disorder prediction	833	856	-	-
	Trre2g03757	856	MobiDBLite	consensus disorder prediction	790	809	-	-
	Trre2g03757	856	FunFam	Receptor-like protein kinase FERONIA	585	802	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre2g03757	Trre-Chr2	42674128	42676912	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre2g03757	15	856	Receptor kinase-like Gene Family	AT3G51550	53.432	0.0	860

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Trre2g03757		Malectin_like	2.5e-38	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre2g03757	-		-	gmx:100791236	1350.11