Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trre2g03715 | ATGGAGGGAAAAACTGAGGATGAAGTGGTGGATGTTGAAAGTGCTTCTGGTGCTTCTGTAAATGATGACTCAGATGATGAGGGATCCTTGCCTTCTGAAATTGATGACAAATTGCATCACGAGGAACCTCTAACTGAGGCGGAGATAGAAGACCTTATTTCTGAGCTATTAGAAGTGGAGAGTAAGGCTGCGGAAGCCCAAGAAACTCTTGAAGAAGAGTCTCTTGCTAAAGTGGAGAGTGAAGTTAGACAAGAACTGCAGCAAACGCTACAGGGGAATGATCTGGAAAATGCCGTTGCTGATGAGATGACTACTTTTAAAGAAGAGTGGGAAGCTGTTCTGGATGACCTTGAAACTGAAAGTTCCCACTTACTGGAACAACTTGATGGGGCTGGAATTGAACTCCCAAGTCTTTATAAGTTGATCGAAAGAGAAGCTCCAAACCGTTGTTGTACTGAAACATGGAAAAAGCGAAATCATTGGGTTGGGTCTCAGGCAACTACTGAAATTGCTACATCAGTTTCTGATGCTGAGAAATATCTACAAATAAACAGACCTGTTAGAAGGCGACATGGCAAGTTATTGGAAGAGGGTGCTAGTGGCTTTCTCCAAAAAAAAATTTCTCCCGAAACTCTGGTACCGGGAAAAAAAGAAACAGAGGGGGACTGGGATGTGTTCAATAAAATAATTTCTGATGAAAGTGGTATTGACGCCTCATTTGGCAGTAAGACTTGGGCTTCTGTTTATTTAGCCAGCACTCCACAGCAAGCTGCCTTAATGGGACTCGAATTTCCTGGAGTTAATGAGGTGGAGGAAATTGATGATGTTGATGACAATTCTACTGATCCATTTGTTGCAGCAGCTGTTGCAAATGAAAGAGAATTGGATCCTTCCGAGGAGCAAAGTAGACATTTTAAAAAGGTCAAAGAAGAGGAAGATGCAATTGTTGATAAGAAGCTTCAAATACGTTTGAAACACAGGAGGCATCGTAAGAAAAGTAAACAGCGAGAAACAATCACACCTATCATGTCAATGGAGAGCCATGTACAGAAGCATTCATCTGTTGATCAATTTAACCCTGATACTAATGAAGGAACTAGAGTTGAAGGGGAAATTGTGTCTAACAATAACGAGGCTGCATGTTTGAATATGGAGGCCGATAAAATTGAAGGTCTAGATGCCAGTTTTCATCTTGACAAAGAAAATTCAATGGGAGATGGTAATTTGTCAGATCCTCCCAAATCTTCATTGGGTGATGTTATTGAACAGAGAGGAACCAAGCGTCCGAATGATGGTGAACTCGATGCTGATAAAAAGAAGGGCCGGAGTGATCTCGTCAACAGCGACAATGATATACCCGTTTCCGATTCTGATAGTAGCGATTCAGATGATTCAGACGATTCAGACGACTCGGATGATTCAGATGTTTCAGAGACAAATGTTACAATAAGCACTAAACGAAGGCGCAAAAAGAAGATAAGGAGGATACTTGATGACACAGAATTAGGAGAAGAGACAAAAAAGAAGATAGCAATTGAAAAGGAACGTCAAGAACGCCTGAAGTCTTTGAGAGTGCAGTTTTCTGCTTCATCATTTGACAATAGCTCGGCTGGCTGTAATGGGAGTTCTTCTGAAGGTGCAAGTGTTGAAATTCTTGGTGATGCGCTGGCAGGTTATATAGTGAATGTTGTGAGAGAGAAAGGTGAAGAAGCGGTTAGAATACCTCCGAGCATTTCAGCAAAGCTGAAGACCCATCAGATTGCTGGTATAAGGTTTATGTGGGAAAATATAATACAGTCAATCAGAAAAGTTAAGTCTGGAGATAAAGGTCTAGGGTGTATTCTAGCTCATACCATGGGTCTTGGTAAAACATTTCAGGTAATAGCTTTCTTGTATACGGCGATGAGAACTGTTGATTTGGGTTTAAGAACTGCACTTATAGTCACACCTGTCAATGTGCTACATAATTGGCGGACGGAGTTCATCAAATGGGCACCATCAGAATTAAAGCAACTCAAGGTCTATATGCTGGAAGATGTATCAAGAGATAGGAGGGCACAACTGCTCGCTAAATGGAGAGCGAAAGGTGGTGTATTCTTAATTGGCTATGCTGCTTTCCGGAATTTGTCTTTTGGAAAAAACGTGAAAGACCGGGAGACGGCTAAGGAAATTTGCCATGCTTTGCAGGATGGCCCCGACATTCTTGTGTGTGATGAAGCCCATATCATTAAAAATACTAATGCAGAAGTTACTCATGCCTTGAAACAAGTAAAGTGCCAGCGAAGAATTGCGCTTACAGGATCACCTCTTCAAAACAATCTCATGGAATATTATTGTATGGTTGATTTTGTACGAGAAGGTTTTCTTGGAAGCAGTCATGAGTTTAGGAACCGCTTCCAAAATCCTATAGAGAATGGTCAACACACTAATTCCACTCAGACTGATGTAAAAATTATGAACCAAAGATCTCACATCCTCTATGAACAATTAAAAGGCTTTGTCCAAAGAATGGATATGAATGTTGTGAAGAAGGACCTACCGCCCAAAACTGTTTTCGTGATAACAGTCAAGCTTTCTCCCCTACAAAGAAAATTGTACAAGAGATTCCTTGACGTGCATGGGTTCACTACTGTCAAGGAAAATCATGAAAAATTAAGAAAGAGGAGTTTTTTTGCTGGATATCAGGCATTGGCTCGGATATGGAACCACCCTGGGATCTTGCAATTGACAAAAGAAGACAAGGACTGTGTAAGACCTGAAGATGCTGTTGAGAATTTCCTTGTAGATGATATCTCAAGTGATGAAAATTCCGATTCTAATGTGCTTGCTGGAGAGAAATTGAAGTATACAAATGATTTGCTGCAAAGGAAGGATGGTAATGGCTTTTTCATAAAGGGCTGGTGGAAAGATATTCTTCATGAAAAAATTTATAAAGAGCTTGATCAAAGTGGAAAAATGGTTTTGCTAATTGATATACTTACCATGAGTTCTGATGTGGGCGACAAGGTGTTAGTTTTTAGTCAGAGCATACCAACGCTAGACCTCATAGAACTTTATCTCTCAAAGTTACCACGACGTGGCAAACGAGGGAAGCTGTGGAAGAAGGGAAAAGATTGGTATAGGCTGGATGGAAGGACAGAGAGCTCACAAAGGCAGAAGCTTGTTGAGAGATTTAATGAGCCTTCAAATAAAAGAGTAAAATGCACACTGATTTCGACTAGAGCTGGCTCTTTGGGTATTAATCTTCATGCAGCTAATCGTGTTGTTATAGTTGATGGTTCTTGGAATCCAACATATGATCTTCAGGCTATCTATCGAGCTTGGAGGTATGGTCAGAAAAAGCCTGTGTTTGCTTATCGGTTGCTGGCTCATGGAACTATGGAAGAGAAAATATATAAGCGCCAGGTTACAAAAGAAGGGCTTGCTGCTAGAGTGGTCGATAGACAACAGGTGCATAGGACTATATCTAAAGAAGAAATGTTGCATCTCTTTGAGTTTGGTGATGACGAGAATCCTGAGACTTTGGCTGAGCTAAGTAAATATGATGGGCTTACTTGTGAACAAAATCCGATTTTGGCTGGGGATTCACTGAAACATACAATACCACATTCAAATGGAAGCAGTTATTCTGATAAGCTGATGGAAAGCTTACTAGGAAAACATCATCCCCGGTGGATTGCCAATTATCATTTACATGAATCCTTGTTACAAGAAAACGAAGAGGAAAGGCTATCAAAAGAGGAGCAAGATATGGCTTGGGAGGTGTATCGCAAATCGTTGGAATGGGAAGAAGTTCAGAGAGTACCGATTGGTGAGGCTGTGCCTGAACAAAAGCCAGAAGAGTCAAAGGCAGAAGAATCCCAAGAACCAGAAAAATGGACCCTTTCAACTAAGCTGAGAAATCGTTTCACAAAGCGGCAATGCACTAACCTGGCGCACTTGCTGACACTTAGAAGCCAAGGAATAAAATTTGGGCGCAGTACAGTCTGTGGAGAATGTGCCCGGCCGATAAGGTGGGAAGACTTGAAGATTAAATAG | 4038 | 0.4116 | MEGKTEDEVVDVESASGASVNDDSDDEGSLPSEIDDKLHHEEPLTEAEIEDLISELLEVESKAAEAQETLEEESLAKVESEVRQELQQTLQGNDLENAVADEMTTFKEEWEAVLDDLETESSHLLEQLDGAGIELPSLYKLIEREAPNRCCTETWKKRNHWVGSQATTEIATSVSDAEKYLQINRPVRRRHGKLLEEGASGFLQKKISPETLVPGKKETEGDWDVFNKIISDESGIDASFGSKTWASVYLASTPQQAALMGLEFPGVNEVEEIDDVDDNSTDPFVAAAVANERELDPSEEQSRHFKKVKEEEDAIVDKKLQIRLKHRRHRKKSKQRETITPIMSMESHVQKHSSVDQFNPDTNEGTRVEGEIVSNNNEAACLNMEADKIEGLDASFHLDKENSMGDGNLSDPPKSSLGDVIEQRGTKRPNDGELDADKKKGRSDLVNSDNDIPVSDSDSSDSDDSDDSDDSDDSDVSETNVTISTKRRRKKKIRRILDDTELGEETKKKIAIEKERQERLKSLRVQFSASSFDNSSAGCNGSSSEGASVEILGDALAGYIVNVVREKGEEAVRIPPSISAKLKTHQIAGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRTVDLGLRTALIVTPVNVLHNWRTEFIKWAPSELKQLKVYMLEDVSRDRRAQLLAKWRAKGGVFLIGYAAFRNLSFGKNVKDRETAKEICHALQDGPDILVCDEAHIIKNTNAEVTHALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTQTDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRKLYKRFLDVHGFTTVKENHEKLRKRSFFAGYQALARIWNHPGILQLTKEDKDCVRPEDAVENFLVDDISSDENSDSNVLAGEKLKYTNDLLQRKDGNGFFIKGWWKDILHEKIYKELDQSGKMVLLIDILTMSSDVGDKVLVFSQSIPTLDLIELYLSKLPRRGKRGKLWKKGKDWYRLDGRTESSQRQKLVERFNEPSNKRVKCTLISTRAGSLGINLHAANRVVIVDGSWNPTYDLQAIYRAWRYGQKKPVFAYRLLAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPETLAELSKYDGLTCEQNPILAGDSLKHTIPHSNGSSYSDKLMESLLGKHHPRWIANYHLHESLLQENEEERLSKEEQDMAWEVYRKSLEWEEVQRVPIGEAVPEQKPEESKAEESQEPEKWTLSTKLRNRFTKRQCTNLAHLLTLRSQGIKFGRSTVCGECARPIRWEDLKIK | 1345 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trre2g03715 | 1345 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 604 | 787 | IPR014001 | - | |
| Trre2g03715 | 1345 | MobiDBLite | consensus disorder prediction | 424 | 446 | - | - | |
| Trre2g03715 | 1345 | Pfam | SNF2-related domain | 604 | 906 | IPR000330 | GO:0005524|GO:0140658 | |
| Trre2g03715 | 1345 | MobiDBLite | consensus disorder prediction | 398 | 490 | - | - | |
| Trre2g03715 | 1345 | Gene3D | - | 555 | 836 | IPR038718 | - | |
| Trre2g03715 | 1345 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 991 | 1159 | IPR001650 | - | |
| Trre2g03715 | 1345 | Gene3D | - | 847 | 1189 | IPR027417 | - | |
| Trre2g03715 | 1345 | MobiDBLite | consensus disorder prediction | 1271 | 1292 | - | - | |
| Trre2g03715 | 1345 | MobiDBLite | consensus disorder prediction | 1274 | 1292 | - | - | |
| Trre2g03715 | 1345 | SMART | ultradead3 | 578 | 799 | IPR014001 | - |
Showing 1 to 10 of 20 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Trre2g03715 | K10779 | - | egt:105955484 | 1634 |
Showing 1 to 1 of 1 entries