Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03635 ATGGCTTCTCTCTCTTGCTCCGCCACAGACCTCGCTCCACTCCTCACTGCCGCCGCAAACGCAACCGCTGTGGCAAACTATCTCTGCACCCAATTTGATGCCATCTCCAAAAAGTTTAGTGATACTACCTATGCAATAGACAACACCTACCTTCTCTTCTCAGCTTACTTAGTCTTCGCCATGCAGCTCGGTTTTGCCATGCTCTGCGCCGGCTCTGTTCGAGCCAAAAACACCATGAACATCATGCTCACCAATGTCCTTGACGCCGCTGCGGGTGGCCTTTCATATTACCTTTTCGGCTTCGCCTTCGCCTTCGGAGCACCCTCCAACGGCTTCATTGGCCGCCACTTTTTCGGTCTAAGGGATTACCCTTCACCTTCACCCTCTGGAGGAGACTACAGCTTCTTCCTATACCAATGGGCTTTTGCCATAGCTGCTGCAGGCATCACTAGTGGCTCCATTGCAGAGAGAACACAGTTTGTCGCATATCTCATATATTCTTCTTTCTTAACCGGTTTTGTTTATCCCATTGTTTCGCATTGGATTTGGTCCGTTGATGGTTGGGCCAGCCCAACCCGAACCGATGGTGATGTTTTATTCGGGTCTGGGGTAATTGACTTTGCTGGTTCAGGTGTGGTTCACATGGTTGGTGGTATAGCAGGGCTATGGGGGGCATTCATAGAAGGTCCGAGAATCGGCCGGTTTGACCGGACCGGTCGGGTTGTTGCATTAAAAGGACATAGCGCATCATTGGTGGTGTTGGGTTCATTTTTATTATGGTTCGGTTGGTATGGGTTCAACCCCGGTTCGTTTTTAACAATTGTAAAAGGCTACAACAATAACAAAGGAGATTATTATGGTCAATGGAGTGCTATTGGAAGGACAGCTGTCACAACAACATTGGCTGGATGCACTGCGGCTTTAACAACTCTGTTTAGTAAACGGTTATTGGTTGGACACTGGAACGTGACTGACGTGTGTAACGGTTTACTTGGCGGTTTTGCTGCGATAACTTCGGGTTGTTCTGTTGTAGAACCATGGGCTGCAATTGTGTGTGGGTTCATTGCAGCATGGGTTTTGATTGGACTCAATAAACTAGCAGTTAAGGTGAAGTATGATGATCCTTTAGAGGCGGCGCAATTACACGGAGGGTGTGGCGCGTGGGGGGTGTTGTTTACAGGATTGTTTGCGAAAGGGGAATATGTTGACGAGATTTATGGGATTGGGAGGCCGTATGGATTGTTGATGGGTGGTGGAGGGAAGTTGTTTGCGGCGCAAGTGGTTGAGGTGTTGGTGGTATGTGTATGGGTTACGGTGACAATGGCACCATTGTTTTATGGGCTAAATAAGATGAAATTGTTGAGGATTTCAAGGGATGATGAAACTGCGGGGATGGATTTGACGAGACATGGTGGATTTGCTTACGCTTATAATGATGAAGATGATGATGAGTCGATCAAGAGATTAGGGTTTATGATGGGTAGGATTGAGCCCGCCGGGAGTGTAACTCCCTCCGCTACTGGACATGATTCTCAGACACCAGCCACTGCACCACCAGTGTGA 1563 0.483 MASLSCSATDLAPLLTAAANATAVANYLCTQFDAISKKFSDTTYAIDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNGFIGRHFFGLRDYPSPSPSGGDYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPIVSHWIWSVDGWASPTRTDGDVLFGSGVIDFAGSGVVHMVGGIAGLWGAFIEGPRIGRFDRTGRVVALKGHSASLVVLGSFLLWFGWYGFNPGSFLTIVKGYNNNKGDYYGQWSAIGRTAVTTTLAGCTAALTTLFSKRLLVGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIVCGFIAAWVLIGLNKLAVKVKYDDPLEAAQLHGGCGAWGVLFTGLFAKGEYVDEIYGIGRPYGLLMGGGGKLFAAQVVEVLVVCVWVTVTMAPLFYGLNKMKLLRISRDDETAGMDLTRHGGFAYAYNDEDDDESIKRLGFMMGRIEPAGSVTPSATGHDSQTPATAPPV 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03635 520 Gene3D Ammonium transporter AmtB like domains 24 492 IPR029020 -
Trre2g03635 520 FunFam Ammonium transporter 28 490 - -
Trre2g03635 520 SUPERFAMILY Ammonium transporter 44 456 - -
Trre2g03635 520 NCBIfam ammonium transporter 47 475 IPR001905 GO:0008519|GO:0016020|GO:0072488
Trre2g03635 520 ProSitePatterns Ammonium transporters signature. 206 231 IPR018047 GO:0008519|GO:0016020|GO:0072488
Trre2g03635 520 MobiDBLite consensus disorder prediction 499 520 - -
Trre2g03635 520 Pfam Ammonium Transporter Family 50 475 IPR024041 GO:0008519|GO:0016020|GO:0072488
Trre2g03635 520 PANTHER AMMONIUM TRANSPORTER 21 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03635 Trre-Chr2 35902152 35903714 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03635 2 507 Inorganic Solute Cotransporters AT1G64780 77.344 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03635 K03320 K07573 gmx:100797209 795.423