Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03625 ATGGAGAAAAATGTATATGCATTGTTTGTGATGTTGTTCATATTTGCTCTTATTTTCTCTCTATCTGAAGAGCTTAATGCAGATGGAAAATATCTTATGGACATAAAAGAGAGATTGTTTGATAAATACAATCATCTTGAGAATTGGAATTCAAGTGATTCAACACCTTGTGGTTGGAAAGGTGTCATCTGCAACAATGATATCAATCCATTGGTTGAATCTCTTGATTTACATTCAATGAATCTCTCTGGCTCTTTGTCTTCCAGCATTGGTGGTTTGGTTCATTTGCTTCACCTTAACCTTTCTCAAAACACTTTCTCTGGTTTTATACCAAAGGAAATTGGAAACTGTTCAAGTTTGCAGGTTCTTAGTCTCAATATAAATGAATTTGGAGGTCAAATTCCTGTCGAAATAGGCCGGCTTTCAAAGTTAACCGAATTGCATCTTTCCAACAATCAGCTATCAGGACCTTTACCAGATGAAATTGGTAACCTTTCTTCACTCTCAATACTTACTCTATACACAAATCATTTTAATGGATCTTTGCCGCCTTCTATCGGAAATCTTAAAAGATTGATTCGGTTTCGAGCTGGACAGAATATGATCTCAGGAAGTTTACCTCAAGAGATAGGTGGATGTGAGAATTTGGAGTATCTTGGTTTAACTCAAAATAAGATAAGTGGTGAAATACCAAAAGAACTTGGTTTACTCAAGAACTTGCAATGCTTGGTCCTAAGGGAAAATGATCTTCATGGTGCTATACCTAAAGAGCTTGGAAACTGTACTAATTTGGAGGTTCTTGCCCTCTATCAGAACAATCTTGTGGAAGAAATTCCAAAGGAGCTTGGAAAACTTGAATTCCTAAAGAGACTATACCTTTACAGAAATGAGTTGACAGGAAATATTCCAAGGGAAATTGGAAATCTTTCTGTTGCAATTGAGATTGATTTTTCGGAGAATCTTCTAACAGGTGAGATACCGATCGAGTTGGTTAATATAAAAGGGTTGCAGTTGCTTCATCTCTTCGAGAACAAGTTAACCGGCGCGATTCCAAATGAGTTCACCACATTGAAAAACCTAACTGAGTTGGATCTCTCTATTAATCATCTCAATGGTACTATTCCTATTGGATTTCAGGATTTGACCAAACTTACATCTTTGCAACTCTTCAATAACTCATTAAGTGGTAGAATTCCGTATGCGCTCGGAGCAAATAGTCCACTTTGGGTGCTTGATTTATCATTCAACTTTTTGGTTGGAAGAGTTCCAATTCATCTTTGTCAACTATCTAACTTGATGATGTTGAACTTAGGATCAAACAAACTCGCCGGAAATGTACCTTATAGAATTACAACATGCAAGTCTTTGGTGTATCTTCGCCTCTTCGGTAATAACTTGAGGGGCAAGTTTCCTTCTAATCTATGCAAGCTTGTCAATCTTTCTACAGTTGAGTTGGATCATAATCAATTCACAGGTCCTATTCCTCCACAAGTTGGTTACTTCAAAAAATTGCAAAGACTTCATCTTTCTAACAACCATTTTTTATCTGAATTGCCGAAAGAAATCGGTAACCTCTCTCAGTTGGTCTCATTTAATGTCTCATCAAATTATCTTTCCGGTAGAGTGCCTGTGGAACTTTTCAAATGCAGGAAGCTCCAAAGACTTGATCTCAGCGGCAACGATTTCACAGGTACTTTATCAGGTGAGATAGGAATTCTTTCACAGTTAGAGCTTCTAAGGCTCTCACATAACAATTTTTCTGGTAGTATTCCCTTGGAAGTCGGGAAACTCTGTCGGTTGACCGAGCTACAAATGAGCGAAAACTCATTTTGTGGTTACATTCCACAAGAATTAGGTTCCCTCTCATCCTTGCAAATTGCATTGAATCTCAGCTATAATAAACTTTCAGGCCAAATACCTTCTCAACTTGGGAATCTTATTATGCTAGAATCCCTCCAACTCAATAACAACCATTTGAGCGGCGAAATTCCAAACTCCTTTAACAGTCTTTCAAGTTTACTTTCCTTCAATTTCTCATACAATGATCTTATAGGACCTTTACCTTCTTTATCTCTCTTTCAAAACTCTACATTCAGCTCCTTTGCAGGTAACAAAGGACTATGTGGAGGACACCTTGTCCCTTGTCCAAATTCACCTACACATTCCTCTCCAAATAAACTAGGAAAAATTCTAGCTATAGTTGCAGCTATTATTAGTGCAGTTTCATTGGTTTTAATTCTAGCTATTATATATCTCATGAGAAATTTCACTGTGTCACAACAAGTCATAGATAAACCAAATTCTCCACATGTTTCAAACATGTACTTTTTTCCAAAAGAGGAGTTGAGTTTCCAGGACATGGTTGAAGCTACTGAAAATTTTCATTCCAAATATGAAATCGGAAAAGGTGGTAGTGGAACTGTGTATAGAGCAGATATATCAACTGATGATCATACAAATATGAATTCAATTGCTATAAAAAAGTTAACATCAAACAGTCACAGCTTCGATGTAAATGGCTGCTTCCGCGCCGAAATCTTAACTTTAGGAAAAATAAGGCATAGAAATATTGTGAAGTTATACGGTTTCTGCAACTATAGTGGCTCAAATATGTTACTTTATGAGTACATGGAAAAGGGTAGTTTGGGAGAGTTACTTCATGGAGAATCTTCCTCTAGTCTTGATTGGTATTCCAGGTTTCGGATTGCTCTAGGAACTGCACAAGGACTCTCTTATTTGCACCATGATTGCAAGCCTCGGATTATTCACCGCGACATTAAGTCCAATAACATACTTATTGATCATGAATTTGAAGCTCATGTCGGTGATTTTGGTTTGGCTAAGCTAATTGATATCTCAAAGTCTAAATCAATGTCTGCAGTTGTTGGTTCTTATGGCTACATTGCCCCTGAATATGCATACACAATGAAAGTCACAGAAAAATGTGATGTCTACAGCTATGGAGTAGTCCTATTGGAGTTACTAACAGGCAAGAAACCAGTCCAATCATTGGATCAAGGTGGTGGTGATCTTGTAACTTGGGTCACAAATCATATCAACAAATATTCATTGAAACTAGACATCATTGATGCAAAATTGGATCTACTACATGAAATTGATGTTGCACAAATATTTGATGTCTTAAAAATTGCGTTACTATGCACCGACACTTCTCCTTCTAGACGACCAACTATGCGTAAAGTTGTTGCAATGCTTACAAGTTCTAGTAAAAGGAAAGAACAATCTTCATTCTCACCATGTCATGAATCAAGTAACATAGAAGAATGA 3288 0.3692 MEKNVYALFVMLFIFALIFSLSEELNADGKYLMDIKERLFDKYNHLENWNSSDSTPCGWKGVICNNDINPLVESLDLHSMNLSGSLSSSIGGLVHLLHLNLSQNTFSGFIPKEIGNCSSLQVLSLNINEFGGQIPVEIGRLSKLTELHLSNNQLSGPLPDEIGNLSSLSILTLYTNHFNGSLPPSIGNLKRLIRFRAGQNMISGSLPQEIGGCENLEYLGLTQNKISGEIPKELGLLKNLQCLVLRENDLHGAIPKELGNCTNLEVLALYQNNLVEEIPKELGKLEFLKRLYLYRNELTGNIPREIGNLSVAIEIDFSENLLTGEIPIELVNIKGLQLLHLFENKLTGAIPNEFTTLKNLTELDLSINHLNGTIPIGFQDLTKLTSLQLFNNSLSGRIPYALGANSPLWVLDLSFNFLVGRVPIHLCQLSNLMMLNLGSNKLAGNVPYRITTCKSLVYLRLFGNNLRGKFPSNLCKLVNLSTVELDHNQFTGPIPPQVGYFKKLQRLHLSNNHFLSELPKEIGNLSQLVSFNVSSNYLSGRVPVELFKCRKLQRLDLSGNDFTGTLSGEIGILSQLELLRLSHNNFSGSIPLEVGKLCRLTELQMSENSFCGYIPQELGSLSSLQIALNLSYNKLSGQIPSQLGNLIMLESLQLNNNHLSGEIPNSFNSLSSLLSFNFSYNDLIGPLPSLSLFQNSTFSSFAGNKGLCGGHLVPCPNSPTHSSPNKLGKILAIVAAIISAVSLVLILAIIYLMRNFTVSQQVIDKPNSPHVSNMYFFPKEELSFQDMVEATENFHSKYEIGKGGSGTVYRADISTDDHTNMNSIAIKKLTSNSHSFDVNGCFRAEILTLGKIRHRNIVKLYGFCNYSGSNMLLYEYMEKGSLGELLHGESSSSLDWYSRFRIALGTAQGLSYLHHDCKPRIIHRDIKSNNILIDHEFEAHVGDFGLAKLIDISKSKSMSAVVGSYGYIAPEYAYTMKVTEKCDVYSYGVVLLELLTGKKPVQSLDQGGGDLVTWVTNHINKYSLKLDIIDAKLDLLHEIDVAQIFDVLKIALLCTDTSPSRRPTMRKVVAMLTSSSKRKEQSSFSPCHESSNIEE 1095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03625 1095 Gene3D Ribonuclease Inhibitor 378 723 IPR032675 -
Trre2g03625 1095 Gene3D Ribonuclease Inhibitor 180 276 IPR032675 -
Trre2g03625 1095 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Trre2g03625 1095 Gene3D Ribonuclease Inhibitor 277 377 IPR032675 -
Trre2g03625 1095 ProSiteProfiles Protein kinase domain profile. 794 1084 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03625 1095 Gene3D Transferase(Phosphotransferase) domain 1 877 1092 - -
Trre2g03625 1095 FunFam Leucine-rich repeat receptor-like protein kinase 877 1088 - -
Trre2g03625 1095 SUPERFAMILY L domain-like 376 717 - -
Trre2g03625 1095 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 182 276 - -
Trre2g03625 1095 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 405 719 - -
Trre2g03625 1095 MobiDBLite consensus disorder prediction 1074 1095 - -
Trre2g03625 1095 SMART LRR_typ_2 141 164 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 646 669 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 285 309 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 429 453 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 501 525 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 237 261 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 573 597 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 357 380 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 165 189 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 381 405 IPR003591 -
Trre2g03625 1095 SMART LRR_typ_2 93 117 IPR003591 -
Trre2g03625 1095 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 757 876 - -
Trre2g03625 1095 ProSitePatterns Protein kinases ATP-binding region signature. 800 828 IPR017441 GO:0005524
Trre2g03625 1095 SUPERFAMILY Protein kinase-like (PK-like) 767 1072 IPR011009 -
Trre2g03625 1095 Gene3D Ribonuclease Inhibitor 27 179 IPR032675 -
Trre2g03625 1095 Pfam Protein kinase domain 794 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03625 1095 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Trre2g03625 1095 SMART serkin_6 794 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03625 1095 FunFam Piriformospora indica-insensitive protein 2 278 376 - -
Trre2g03625 1095 SUPERFAMILY RNI-like 74 417 - -
Trre2g03625 1095 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 330 1072 - -
Trre2g03625 1095 Gene3D Phosphorylase Kinase; domain 1 757 876 - -
Trre2g03625 1095 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Trre2g03625 1095 Pfam Leucine rich repeat 335 394 IPR001611 GO:0005515
Trre2g03625 1095 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 25 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03625 Trre-Chr2 35687384 35690990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03625 19 1072 Receptor kinase-like Gene Family AT5G56040 37.711 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre2g03625 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03625 - - psat:127091273 1826.22