Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03617 ATGAACTGCTTTCCGTGTTGTGGCCAAAAAAATAAGAAAAGTAATAGTATGAAAGACCATGATTCTCCCACACAACATGAAATCACTTCTGATATGAAGAAACAAAGGGGGGATGAGCAAATCCAAGGAGACCCTACAAACATTAATGCGCATAATTTCACTTTTCGTGAGCTTGCAACTGCGACAAAGAATTTTCGACAGGAATGTCTCCTTGGTGAAGGAGGATTTGGAAGAGTTTACAAAGGGGTTATTCCTACAACTGGACAGGTTGTGGCCGTGAAGCAACTCGACAGACATGGGATGGAAAACAGCAAGGAATTTCTGTCTGAAGTTTCTCTGCTGAGTCTTGTTCACCATGACAATCTTGTCAATCTAATTGGTTATTGTGCTGATGGCGATCAACGTCTTTTGGTTTATGAATACTTTCCTGGCTCTAATCTTGAAGAACGTCTTCTTGACAATAAAACGGATGAACCACCATTAAATTGGTATGAAAGAATGAAAGTAGCAGCAGGTGCATCGAAAGGACTAGAATACTTGCACGACAGCGCCAATCCTCCAATTATATACCGTGACTTGAAAGCCGCAAACATCTTGTTGGATGTTGATCTTAATGCAAAACTATATGATTTCGGAATGGCAAGACTTTGTGGTGGAGACAAGATGAACCATGCACCACCAAGAGTTATGGGTACATATGGTTATTGTGCTCCTGAATATACAAGAACAGGTCATTTCTCATTGAAATCAGATGTATACAGTTTCGGAGTTGTCATGCTTGAACTTATCACTGGTCGACGTGCCATTGACACCACAAGATCGAACGAAGAGCAAAATCTAGTTTCATGGGCACAACCCTTATTTAGGGACCCAAAGAAATATCCAGATATGGCAGATCCACTTCTCAATAAGCAATTTCCAGAAAAGGATCTCAACCAAGCTGTTGCAATAGTAGCAATGTGCTTACAAGAGGAACCAGAAGCTCGTCCTTTGATCGGCGACGTTGTAACCGCTCTGAGTTTTCTTTCGACAGTTCCAGCAGAACCTATTCCACCACCCTTACGCTCCGCTGCTACCTCTGTCTCTAAGCATAGTGTTGCTACTGAAAGCGAATACGAAAGTGAGACTGGAAGTGAATCAGAAGGAGAAACTGATGTCTCAAGCCAACCTCAAAAAAGGGTGTCTTCGAAGAAATCAAGCCGAAAAAGCAGCTCGAGATCAAGGAATAAAACAATCAGTAAAGATTCAGCAGATGAAAGTGTTTCTTCAAGTGGCAAAAGCAGTAAAAAATGGCAAAGCTTTGTTGGTAATATAAGCCAAAAGACTAACAGCTCAATAAAATCTTCTATCAGAGAATTAAGTCAGAAGAGCAGTAAAAAATCTTCAAGCAAAGATAAAAGCCAGAAAAGCAGTAGAAAGTCTTCCAAAAGAGGTTTAAGCCATAAGGGAAGTGGAAAATCTTCTGCTAGAGTTTCGAGCTGCATTGAATCGGAAGATGAAAGCATGATTTCATCTCATAGAACTGCCTCATCAAGCCAATATACAAGCAGCTGTATGTCTGATCGTAGCAGCAGCCGAGGAAGTGGAAGTATTCGCTCGGACATTAACGGTAGCAGAAGGCTAGAAGAAAGCATGCGTTTAGACAGGGAATCTGATGACGATCGTATCAGTAGCAGTGAATAA 1683 0.4124 MNCFPCCGQKNKKSNSMKDHDSPTQHEITSDMKKQRGDEQIQGDPTNINAHNFTFRELATATKNFRQECLLGEGGFGRVYKGVIPTTGQVVAVKQLDRHGMENSKEFLSEVSLLSLVHHDNLVNLIGYCADGDQRLLVYEYFPGSNLEERLLDNKTDEPPLNWYERMKVAAGASKGLEYLHDSANPPIIYRDLKAANILLDVDLNAKLYDFGMARLCGGDKMNHAPPRVMGTYGYCAPEYTRTGHFSLKSDVYSFGVVMLELITGRRAIDTTRSNEEQNLVSWAQPLFRDPKKYPDMADPLLNKQFPEKDLNQAVAIVAMCLQEEPEARPLIGDVVTALSFLSTVPAEPIPPPLRSAATSVSKHSVATESEYESETGSESEGETDVSSQPQKRVSSKKSSRKSSSRSRNKTISKDSADESVSSSGKSSKKWQSFVGNISQKTNSSIKSSIRELSQKSSKKSSSKDKSQKSSRKSSKRGLSHKGSGKSSARVSSCIESEDESMISSHRTASSSQYTSSCMSDRSSSRGSGSIRSDINGSRRLEESMRLDRESDDDRISSSE 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03617 560 Gene3D Transferase(Phosphotransferase) domain 1 143 347 - -
Trre2g03617 560 MobiDBLite consensus disorder prediction 536 560 - -
Trre2g03617 560 MobiDBLite consensus disorder prediction 453 469 - -
Trre2g03617 560 FunFam probable serine/threonine-protein kinase RLCKVII 37 141 - -
Trre2g03617 560 Pfam Protein kinase domain 67 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03617 560 SMART serkin_6 65 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03617 560 MobiDBLite consensus disorder prediction 347 560 - -
Trre2g03617 560 MobiDBLite consensus disorder prediction 11 48 - -
Trre2g03617 560 ProSiteProfiles Protein kinase domain profile. 65 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03617 560 MobiDBLite consensus disorder prediction 416 452 - -
Trre2g03617 560 FunFam Serine/threonine-protein kinase PBS1 142 355 - -
Trre2g03617 560 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Trre2g03617 560 PANTHER OS07G0668900 PROTEIN 3 347 - -
Trre2g03617 560 Gene3D Phosphorylase Kinase; domain 1 35 141 - -
Trre2g03617 560 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Trre2g03617 560 MobiDBLite consensus disorder prediction 481 535 - -
Trre2g03617 560 MobiDBLite consensus disorder prediction 358 373 - -
Trre2g03617 560 SUPERFAMILY Protein kinase-like (PK-like) 51 372 IPR011009 -
Trre2g03617 560 MobiDBLite consensus disorder prediction 13 40 - -
Trre2g03617 560 CDD STKc_IRAK 71 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03617 Trre-Chr2 35595905 35598386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03617 1 371 Glycoside Hydrolase AT3G07070 57.908 9.64e-156 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Trre2g03617 Pkinase 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03617 - - gmx:100805544 530.02