Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03526 ATGGCCAATAAAAAGTTCTTGGTTTCTCTCTTGCTCATTACATTGCTCCAAATCCAAACTAAAGTGTTCTGTTTCCAATACCAAGTTGGAGATCTAAATGCTTGGGGTATACCCACCTCAACAAATCCACAAGTCTATACCAAATGGTCCAAATTTCACAACTTCACCCTTGGAGACTCACTTTTGTTTCTATATCCACCAAGTCAAGATTCATTGATTCAAGTAACACAAGAATCATACACGAGTTGCAATATTAAAGATCCAATATTGTTTATGAACAATGGTAACTCTTTATTTAACATAACATCAAAAGGTGATTTTTACTTCACAAGTGGTGTAAATGGTCATTGCCAAAAGCATCAAAAGATTCATATATCTGTTGGAGGAATTGGAAATGTTGATGAAGATGCAAATAGTCCAAGTTCATTGCCTGCAAATGGACCCTCTTATGAAAATGTATTTGGAAGCATTCCAATAGCTCCTTCTACATCAAATTCACACCACCTAACTTCAACTTTTCATGTTCTTATTATTGGATCTCTCATATATGCAATGTTCTTTACTTTAATGTAA 573 0.3438 MANKKFLVSLLLITLLQIQTKVFCFQYQVGDLNAWGIPTSTNPQVYTKWSKFHNFTLGDSLLFLYPPSQDSLIQVTQESYTSCNIKDPILFMNNGNSLFNITSKGDFYFTSGVNGHCQKHQKIHISVGGIGNVDEDANSPSSLPANGPSYENVFGSIPIAPSTSNSHHLTSTFHVLIIGSLIYAMFFTLM 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03526 190 FunFam Early nodulin-like protein 1 24 131 - -
Trre2g03526 190 PANTHER BLUE COPPER PROTEIN 23 149 IPR039391 GO:0009055
Trre2g03526 190 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Trre2g03526 190 SUPERFAMILY Cupredoxins 24 127 IPR008972 -
Trre2g03526 190 Gene3D - 25 138 IPR008972 -
Trre2g03526 190 Pfam Plastocyanin-like domain 42 120 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03526 Trre-Chr2 33509619 33510298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03526 3 159 Phytocyanin Superfamily AT1G64640 55.346 4.77e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03526 - - gmx:100527517 270.781