Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03517 ATGGAAGCATCCCATGAACAACTAGAACTCTCTTTAGGCTCAAGGGAACACACCAATAATATCATCAAAGGGAAAGGAAGTAAATTGGTTATTAGAGGAACAGGACAGCAACAAAAAACACAAGCTTCATATGGGTGCTCCATTTGTGGATTTGCATACACAACTGGACAAGCCCTTGGTGGACATATGACGCGCTACCGTGCACCAGTTGGGATCGCAACCTCCTCGAAACCAAAGGCTCTGAAACCTTATAAACCTATAAAGAAAAGGAATGCCTTGCCTTTAGATTTTGATCTCAACCTTGCAGCTGCGCCTGAAGATGAGCAAAGAAAATCCAAGTTTGCCTTACAAACTAACAAGTCTTGTCTTCTCTGCACCAGCATAGATGCACTTTCATTACCGTAA 405 0.4272 MEASHEQLELSLGSREHTNNIIKGKGSKLVIRGTGQQQKTQASYGCSICGFAYTTGQALGGHMTRYRAPVGIATSSKPKALKPYKPIKKRNALPLDFDLNLAAAPEDEQRKSKFALQTNKSCLLCTSIDALSLP 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03517 134 PANTHER ZINC FINGER PROTEIN ZAT5 28 115 - -
Trre2g03517 134 Pfam C2H2-type zinc finger 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03517 Trre-Chr2 33227734 33228278 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03517 11 114 C2H2 Transcription Factor Family AT2G28200 35.897 4.87e-13 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03517 - - tpra:123889127 161.384