Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03510 ATGGCAATGGCAATGACAATGCCTTTTAGTTTAAGGAATAAGCTCAAGACTCTTTGTGCTTATGGTGATGGTTGGTCTTATGCCATTTTTTGGCGTTTTCATGAGAAGAATCCTATGTTGTTGAATGTGAAAGAAGCATACTATGAAGATCAATTAGGAGAAGTGATTCAAAACATGATTCCACAAGTGCATTTGTTGGGTGAAGGAATTGTTGGTGAAGCTGCTTTCACAAACAAGCACGGTTGGTTGCATTCAGTTAGTTGTGAGGTTGATTCTGGATTGTATCAACAATTCTCTTCTGGAATAATAAAGACAATTGTGGTTATACCTGTCAAAGCATGTGGAGTGGTACAGTTTGGATCCAGAAATAAGATTTTCGAGACAATGGATTTTTTGGATCGAACACAAAGTTTGCTCAAGGATACAGATGATATCGACACGATTGAATTGTCAGGAAATGACTTTTTTCCATTGGATTTTACAAATGATGATCTTAATGGATTGATAGCTTCCATTTCCTCTGAAAATTCATGTGATTGGAATCTCAATATTGCGCACGATGAAAACCATAACGATCTGAGAGAAGTTTTTTCTTCTTGTGAAGACAGGAGCCTAACTCTTAGTGACCAGTTGAAATGTACCATAGAAGCTTTTATGGAGCCTAACTCTTCTATGGACAACTTGATTTCCCAAAATACCCCTCTTTTTGCATTTGAAACAATGGCACAAGAAGTTAGCACTTCATTTGCTAGCAGCGTAGTTCATGATTCATCGTTGTCCTCATTGCAATATTCAATGGATAATGTTGTGACAAAAGTTGATTTACCAGCAAGTTCAGGTACACTCGATGGAATCTCTAGTCGCTTAGAGCCGATTGATATGTCAGAAGAAATTTTGAAGTTCAGTTCCATGGATGATCTTTGTCAATGGTTTGCTCCTTTGCCAGAAGCTACCGGTAGCAGCAGAACAATGATTCAATTGGATAGTAACGTTTCTGAACCGATAGAATGTAATCCTACTTGTTCTGATCTAGGCCTAGCCGAGAAAGAAACATCTGTAGTAATACATAGTTCCGAGAATAATTTCTTGGATAATATGGAATTTGATTTGGGAGATTTGGGATGTGATCAAGGTAGTGAATGGAGGGTGAATTTACTTTCACCAGTGGTGAGTGCGGCTACTGATAATACCGGCTTTTCTGAATGCGTATCAGAGTTGAATACTAGTACACCGACCGATAATACTCGGAAGAGGTTATTCTCAGAGTTAGGAATTGAAGAGTTTTTGAGAGGTGAAACAAATTACATCAATCCTTTTAATACTTCTAGTTTTGAAAATGAGTTATCATCATTATCAAATAAGAAGCATACGGTGGAATTTTCACCTATGAATAGAACTTCATTGCATTTCGGAAACCTTGATGGAGCCGAAACTAGAGCAAACTTGATGCATTCTGTTTCTGAATTGGACAAGTCCAGTAGTGTTTTAACTATGTTGGTTAATGATCGAAATAGTATCAATATCAAGAGTGCTGTTCCGGTACACCCTAGAAGATCAGAAGAGCCCATGAAACCTACAAAGAAGAAGGCTAAGCCGGGGGAGAGTACTCGTCCGCGACCAAAAGATCGGCAACAGATCCAAGACTGTATTAAAGAGTTGAGAGGAATCATCCCTCATGGCGGAAAGTGTAGCATTGATTCTTTGTTAGACCGTACGATCAGATACATGCTTTTTTTACGCGGCATTATTAAATATGCAGACATACTACCAGAGCCTAATGAGCCTAAGCTTATTGACCAAGAAAATGAAGTGACTCCAAAAGACAAAAACCATGGTGCTACATGGGCATATGAAGTAGCAAACCAAACAATGGTATGTCCAATTATAGTCGAAGACATGAATCCACCTGGCCAAATGCTTATAGAGATGCTTTGTGAGGATCAAGGTTTCTTCCTTGAGATAGTCGACATAATTCGAGGTTTCGGGCTGAATATTTTGAAAGCAAAGATGGATTTAAGGAAGAATAAGCTATGGGCGCGTTTTATAGTTGAGGCGAATAGACATGTGACAAGGATAGATGTGTTTTGGTCACTTATCCATCTTCTACAACAACCAAATGCTGCCGGAATTGATTCTTCTAATAAGCATGGCGATGAAATTCCTTCCAACATTGCTTAA 2178 0.3857 MAMAMTMPFSLRNKLKTLCAYGDGWSYAIFWRFHEKNPMLLNVKEAYYEDQLGEVIQNMIPQVHLLGEGIVGEAAFTNKHGWLHSVSCEVDSGLYQQFSSGIIKTIVVIPVKACGVVQFGSRNKIFETMDFLDRTQSLLKDTDDIDTIELSGNDFFPLDFTNDDLNGLIASISSENSCDWNLNIAHDENHNDLREVFSSCEDRSLTLSDQLKCTIEAFMEPNSSMDNLISQNTPLFAFETMAQEVSTSFASSVVHDSSLSSLQYSMDNVVTKVDLPASSGTLDGISSRLEPIDMSEEILKFSSMDDLCQWFAPLPEATGSSRTMIQLDSNVSEPIECNPTCSDLGLAEKETSVVIHSSENNFLDNMEFDLGDLGCDQGSEWRVNLLSPVVSAATDNTGFSECVSELNTSTPTDNTRKRLFSELGIEEFLRGETNYINPFNTSSFENELSSLSNKKHTVEFSPMNRTSLHFGNLDGAETRANLMHSVSELDKSSSVLTMLVNDRNSINIKSAVPVHPRRSEEPMKPTKKKAKPGESTRPRPKDRQQIQDCIKELRGIIPHGGKCSIDSLLDRTIRYMLFLRGIIKYADILPEPNEPKLIDQENEVTPKDKNHGATWAYEVANQTMVCPIIVEDMNPPGQMLIEMLCEDQGFFLEIVDIIRGFGLNILKAKMDLRKNKLWARFIVEANRHVTRIDVFWSLIHLLQQPNAAGIDSSNKHGDEIPSNIA 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03510 725 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 543 585 IPR036638 GO:0046983
Trre2g03510 725 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 59 138 IPR025610 -
Trre2g03510 725 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 7 716 IPR043561 GO:0003700|GO:0006355
Trre2g03510 725 MobiDBLite consensus disorder prediction 514 545 - -
Trre2g03510 725 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 530 579 IPR011598 GO:0046983
Trre2g03510 725 MobiDBLite consensus disorder prediction 508 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03510 Trre-Chr2 33151563 33155228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03510 521 712 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.093 7.30e-62 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03510 - - cam:101509177 952.584