Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03499 ATGCATGTATCTGGTGGCCATTTTAACCCTGCAGTTACTTTTGGTGCTCTTCTTGGTGGTAGAATTTCTGTCCTTAGAGCTGTCTACTATTGGGTTGCTCAACTTCTTGGTTCTATAGTTGCTACCCTTTTATTGAGGCTTGTCACTAATAATATGAGACCACAAGGCTTCAATGTTGCAATAGGAGTAGGTGTAGGGCACGACCTTATACTTGAGATAGTCATGACATTTGGATTAATGTATGTTGTGTATGCAACTGCCATTGATCCCAAAAGGGGCTCTATAGGCACAATTGCTCCCTTAACAATTGCACTTGTTGTTGGGGCAAACATCCTAGCTGGTGGTCCTTTTGATGGAGCATGCATGAATCCTGCTCGAGCTTTTGGGCCTGCTTTAGTGGGCTGGAGATGGCATCATCATTGGATCTTTTGGGTTGGTCCATTACTTGGAGCTGCAATAGCAGCACTTTTATATGAATATATTACGGTTCCAACTGAACCTCCTCATACTCAAACTCATCCTCATCATCAACCTTTGTGTAACGCCCTAAGACCACAAGGCTTCAATGTGGCAATAGGAGTAGGTGTAGGGCACGGCCTTATACTTGAGATAGTCATGACATTTGGATTAATGTATGTTGTGTATGCAACTGCCATTGATCCCAAAAGGGGCTCTATAGGCACAATTGCTCCCTTCACAATTACACTTGTTGTTGGGGCAAACATCCTAGCTGGAGGTCCTTTTGATGGAGCATGCATGAATCCTGCTCGGGCTTTTGGGCCTGCTTTAGTGGGCTGGAGATGGCATCATCATTGGATCTTTTGGGTTGGTTCATTACTTGGAGCTGCAATAGCAGCACTTTTATATGAATATATTATGGTTCCAACTGAACCTCCTCATACTCAAACTCATCATCAACCTTTGGCTCCTGAAAATTATTAG 942 0.4342 MHVSGGHFNPAVTFGALLGGRISVLRAVYYWVAQLLGSIVATLLLRLVTNNMRPQGFNVAIGVGVGHDLILEIVMTFGLMYVVYATAIDPKRGSIGTIAPLTIALVVGANILAGGPFDGACMNPARAFGPALVGWRWHHHWIFWVGPLLGAAIAALLYEYITVPTEPPHTQTHPHHQPLCNALRPQGFNVAIGVGVGHGLILEIVMTFGLMYVVYATAIDPKRGSIGTIAPFTITLVVGANILAGGPFDGACMNPARAFGPALVGWRWHHHWIFWVGSLLGAAIAALLYEYIMVPTEPPHTQTHHQPLAPENY 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03499 313 Gene3D Glycerol uptake facilitator protein. 1 167 IPR023271 -
Trre2g03499 313 Gene3D Glycerol uptake facilitator protein. 168 301 IPR023271 -
Trre2g03499 313 SUPERFAMILY Aquaporin-like 2 171 IPR023271 -
Trre2g03499 313 SUPERFAMILY Aquaporin-like 186 302 IPR023271 -
Trre2g03499 313 CDD MIP 1 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g03499 313 ProSitePatterns MIP family signature. 7 15 IPR022357 -
Trre2g03499 313 PANTHER AQUAPORIN-8 2 166 IPR034294 -
Trre2g03499 313 PRINTS Major intrinsic protein family signature 104 126 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g03499 313 PRINTS Major intrinsic protein family signature 26 45 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g03499 313 PRINTS Major intrinsic protein family signature 141 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g03499 313 PRINTS Major intrinsic protein family signature 71 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g03499 313 Pfam Major intrinsic protein 2 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g03499 313 Pfam Major intrinsic protein 190 289 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03499 Trre-Chr2 32865041 32883566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03499 118 313 Major Intrinsic Protein MIP AT1G73190 56.500 8.35e-67 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03499 K09873 - gmx:100814469 292.737