Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03460 ATGTGGCCTGAAGGCGTTCCTTCAAGTACAGCTACGCAGCGGATTCTCTTTTGCCAGTTCAAAACAATGCAAATGATGTACAAAACAATTTACAGAGCTTTAATAGAGGCTGGACTTGAAAATGAGTATGAACCACAAGACTACTTGAACTTCTTTTGCCTTGGCAATCGCGAGCTCTCCGATAATGAAAACACTTCAAAAACTGTAAAACTTACAGGACAAAACACTCCTCAGGTACTCGCTCAAAAGAACAAAAGATTCATGATTGATGTTCATTCAAAAGGAATGATAGTGGATGATGAATGTGTTAATGGGATCTGCCAACATAAATCAGAGATCCATGGAAGGCACTAG 354 0.3955 MWPEGVPSSTATQRILFCQFKTMQMMYKTIYRALIEAGLENEYEPQDYLNFFCLGNRELSDNENTSKTVKLTGQNTPQVLAQKNKRFMIDVHSKGMIVDDECVNGICQHKSEIHGRH 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03460 117 PANTHER PHOSPHOLIPASE D 1 103 IPR015679 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03460 Trre-Chr2 32091314 32092031 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03460 1 103 Phospholipase D Gene Family (Wang group) AT4G00240 68.932 5.32e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03460 K01115 - gmx:100786241 171.4