Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03455 ATGAATAGTGTTTGCTGGTGGTGGTTGGGCAGAGAAGAAGATCGATGGGTTACAGAGAATGAGTTTTGTAGTGATTTGCGTCCCTCCATTTCCATTCACCGCTTCATCTTTGCTCCTCCGTTCATCCTGATATTAATTTGTTGCTTTATTGAATCAATCCCTCTCATGGCAACTAGACTTCAGTTTGAGAATTCTTGTGAAATTGGTGTTTTCTCAAAACTTACTAATGCCTATTGTTTGGTTGCAATTGGTGGTTCTGAAAATTTCTACAGTGCATTTGAGGCTGAGTTATCAGATGTTATCCCTGTCGTCAAAACCTCCATCGGTGGCACTCGTATTGTTGGTCGTCTTTGTATCGGAAACAAGAATGGGCTTCTTTTGCCTCATACCACCACAGACCAAGAACTTCAACATTTGAAAAACAGTTTACCCGATCAAGTTCGTGTTGAGCGCATAGAAGAAAAGTTATCTGCTCTGGGTAATTGTATAGCATGTAATGACCATGTGGCCCTCACACACACTGATCTCGACAAGGAAACTGAGGAGGTAGTTGCAGATGTTCTTGGAGTAGAAGTTTTCAGGCAGACAGTTGCCGGTAATATTCTTGTTGGCAGTTACTGCACTTTCTCCAACAAAGGTGGTTTGGTTCACCCTCATACTTCGATCGAAGACTTGGATGAATTATCTACACTTCTTCAAGTTCCTTTAGTTGCCGGGACAGTCAACCGTGGTAGCGAAGTAATAGCTGCTGGCATGACAGTCAATGATTGGACAGCATTTTGTGGTTCGGACACCACAGCAACAGAACTCTCAGTGATTGAAAATGTTTTCAAGCTAAGGGAAGCCAAGCCTAGTGACATTGTGGATGAGATGAGGAAATCTCTCTTTGATAGCTAA 897 0.4247 MNSVCWWWLGREEDRWVTENEFCSDLRPSISIHRFIFAPPFILILICCFIESIPLMATRLQFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFEAELSDVIPVVKTSIGGTRIVGRLCIGNKNGLLLPHTTTDQELQHLKNSLPDQVRVERIEEKLSALGNCIACNDHVALTHTDLDKETEEVVADVLGVEVFRQTVAGNILVGSYCTFSNKGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGMTVNDWTAFCGSDTTATELSVIENVFKLREAKPSDIVDEMRKSLFDS 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03455 298 CDD IF6 57 278 IPR002769 GO:0042256|GO:0043022
Trre2g03455 298 Gene3D - 56 280 - -
Trre2g03455 298 Hamap Translation initiation factor 6 [eif6]. 45 298 IPR002769 GO:0042256|GO:0043022
Trre2g03455 298 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 6 56 297 IPR002769 GO:0042256|GO:0043022
Trre2g03455 298 FunFam Eukaryotic translation initiation factor 6 56 280 - -
Trre2g03455 298 Pfam eIF-6 family 59 258 IPR002769 GO:0042256|GO:0043022
Trre2g03455 298 SUPERFAMILY Pentein 56 279 - -
Trre2g03455 298 SMART eIF6neu2 58 259 IPR002769 GO:0042256|GO:0043022
Trre2g03455 298 NCBIfam translation initiation factor IF-6 59 279 IPR002769 GO:0042256|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03455 Trre-Chr2 31877238 31881067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03455 56 298 Eukaryotic Initiation Factors Gene Family AT3G55620 87.243 3.51e-164 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03455 K03264 - twl:119980415 456.832