Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g03454 | ATGGCAACTAGACTTCAGTTTGAAAATTGTTGTGAAATTGGAGCCTTCTCAAAACTTACCAATGCCTATTGTTTGACTGCCATTGGTGGTTCTGAAAACTTCTACAGTGCATTTGAGGCTGAGTTAGCAGATGTTATCCCTGTCGTCAAAACCTCCATCGGCGGCACTCGCCTTGTTGGTTTTCTTTCTGTTGGAAACAAGAACGGACTTTTATTGCCTCATACCACCACAGACCAAGAACTTCAACATCTGAGAAACAGTCTACCTGATCAAGTTGTTGTTCAGCGTATAGAAGAAAAATTGTCTGCTCTTGGAAATTGTATAGCATGTAACGACCATGTGGCCCTTGCACACACTGATCTTGACAAGGAAACTGAGGAGTTGATTGCAGATGTTCTTGGAGTTGAAGTTTTCAGACAGGCAGTTGCTGGTAATATTCTTTTGGGAAGTTACTGCGCTCTGTCCAACAGAGGTGGTTTGGTCCATCCTCATACTTCCGTTGAAGACTTGGACGAACTTTCTAAACTTCTTCAAGTTCCTTTGGTTGCCGGGACTGTCAATCGTGGCAGCGAAGCAATAGCTGCTGGAATGGTAGTAAATGATTGGACAGCATTCTGTGGCTCAGACACCACAGCAACAGAGCTCTCTGTGATTGACAGTGTTTTCAAACTGAGGGGAGACACAGCCTAG | 690 | 0.442 | MATRLQFENCCEIGAFSKLTNAYCLTAIGGSENFYSAFEAELADVIPVVKTSIGGTRLVGFLSVGNKNGLLLPHTTTDQELQHLRNSLPDQVVVQRIEEKLSALGNCIACNDHVALAHTDLDKETEELIADVLGVEVFRQAVAGNILLGSYCALSNRGGLVHPHTSVEDLDELSKLLQVPLVAGTVNRGSEAIAAGMVVNDWTAFCGSDTTATELSVIDSVFKLRGDTA | 229 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g03454 | 229 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 6 | 1 | 227 | IPR002769 | GO:0042256|GO:0043022 | |
Trre2g03454 | 229 | FunFam | Eukaryotic translation initiation factor 6 | 1 | 225 | - | - | |
Trre2g03454 | 229 | PIRSF | Transl_init_IF-6 | 1 | 226 | IPR002769 | GO:0042256|GO:0043022 | |
Trre2g03454 | 229 | NCBIfam | translation initiation factor IF-6 | 4 | 224 | IPR002769 | GO:0042256|GO:0043022 | |
Trre2g03454 | 229 | CDD | IF6 | 2 | 223 | IPR002769 | GO:0042256|GO:0043022 | |
Trre2g03454 | 229 | Gene3D | - | 1 | 225 | - | - | |
Trre2g03454 | 229 | Pfam | eIF-6 family | 4 | 203 | IPR002769 | GO:0042256|GO:0043022 | |
Trre2g03454 | 229 | Hamap | Translation initiation factor 6 [eif6]. | 1 | 229 | IPR002769 | GO:0042256|GO:0043022 | |
Trre2g03454 | 229 | SUPERFAMILY | Pentein | 1 | 224 | - | - | |
Trre2g03454 | 229 | SMART | eIF6neu2 | 3 | 204 | IPR002769 | GO:0042256|GO:0043022 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g03454 | Trre-Chr2 | 31872632 | 31875008 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g03454 | 1 | 225 | Eukaryotic Initiation Factors Gene Family | AT3G55620 | 88.000 | 3.33e-152 | 421 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g03454 | K03264 | - | gmx:100777602 | 412.535 |