Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03436 ATGGCAATGGCTAATTTGATGACAATGTTTATGCTAATAGAGGTGATTACATGCGGGTTCGGGTTCGGTTTCGGGGCAGATGGTGGGTTAAACATGAACTACTATTTGATGAGTTGCCCTTTTGTTGAACCTGTTGTTAAGAATGTAGTCAATAGAGCTTTGGACAATGATCCCACCCTTGCAGCTGGTCTTGTTAGAATGCACTTCCATGACTGCTTCATACAGGGATGTGATGGATCAATTCTAATTGACTCTACTAAGGATAATACAGCAGAGAAGGATTCACCAGCAAATTTGAGCTTAAGAGGATACGAAATCATAGATGATATCAAAGATGAGCTTGAAAGACAATGCCCTGGTGTGGTTTCATGTGCTGATATTCTTGCTATGGCTGCCACAGAAGCTGTTTTCTATGCTGGAGGTCCAGTTTATAACATACCTAAAGGTAGAAAAGATGGAAGGAGATCAAAAATAGAAGATACTAGAAATTTGCCATCCCCTGCCTTCAATGCCTCTGAGCTCATTAGGCAGTTTGGTCAACATGGTTTTTCTGCACAAGAAATGGTGGCTCTCTCTGGGGCTCATACATTAGGAGTGGCAAGGTGTTCATCTTTCAAAACCAGATTGAGCCAAGTGGATCCAGCTTTGGATTCTGAATTTGCTAAGACACTATCCAAAACATGTACTTCTGGTGACAATGCAGAACAACCATTTGATGCAACTAGGAATGATTTTGACAATGTTTACTTCAATGCTTTGTTGAGGAAAAATGGTGTTCTATTTTCAGACCAAACACTCTACAGTAGCCCTAGAACAAGAAACATTGTGAATGCTTATGCAATGAACCAAGCTATGTTCTTCCTTGATTTTCAACAAGCAATGGTGAAAATGGGTTTGCTTGATATTAAACAAGGTTCCAATGGTGAAGTTCGAGACAATTGTCGCAAAATAAACTAA 957 0.3992 MAMANLMTMFMLIEVITCGFGFGFGADGGLNMNYYLMSCPFVEPVVKNVVNRALDNDPTLAAGLVRMHFHDCFIQGCDGSILIDSTKDNTAEKDSPANLSLRGYEIIDDIKDELERQCPGVVSCADILAMAATEAVFYAGGPVYNIPKGRKDGRRSKIEDTRNLPSPAFNASELIRQFGQHGFSAQEMVALSGAHTLGVARCSSFKTRLSQVDPALDSEFAKTLSKTCTSGDNAEQPFDATRNDFDNVYFNALLRKNGVLFSDQTLYSSPRTRNIVNAYAMNQAMFFLDFQQAMVKMGLLDIKQGSNGEVRDNCRKIN 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03436 318 Gene3D Peroxidase, domain 2 165 297 - -
Trre2g03436 318 ProSiteProfiles Plant heme peroxidase family profile. 29 318 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Trre2g03436 318 PANTHER PEROXIDASE 72-RELATED 29 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 FunFam Peroxidase 165 297 - -
Trre2g03436 318 Pfam Peroxidase 46 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 FunFam Peroxidase 33 176 - -
Trre2g03436 318 SUPERFAMILY Heme-dependent peroxidases 29 318 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 Gene3D - 33 318 - -
Trre2g03436 318 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Plant peroxidase signature 292 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g03436 318 CDD secretory_peroxidase 30 317 IPR033905 GO:0004601|GO:0042744
Trre2g03436 318 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03436 Trre-Chr2 31704645 31707188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03436 1 318 Peroxidase AT4G33420 72.642 1.81e-172 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03436 K00430 - gmx:100776019 527.324