Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03426 ATGGCTATGAAAGCTAGCTTGGACCCAAAGAATCATTTTTTACCTTCTTGGACCATCAATGGTGATCCATGTGGTGAATCTTTTGAAGGAGTAGCATGCAATGAAAAGGGTCAAGTTGTTAACATTTCTTTGCAAGGAAAAGGTTTATCAGGGAAGCTTTCATCATCCATTGTTGGTCTTAAACATTTGAAAGGACTTTACTTGCATTATAATTCTTTGTATGGTGAGATACCGAGGGAAGTTTCGAATTTGACTCAACTTGGTGAGTTGTATTTGAATGTTAATCAATTTTATGGGGAAATTCCTTTTGAGATTGGAAGCATGGAGAATTTACAAGTTTTGCAGCTTTCTTATAATCAGTTAACAGGAAGCATACCTACACAAATTGGTGCTTTGAAAAATCTAGGTGATTTGGATATGCTGGTGAGACTTGATTTGAGCTCTAACAATCTCATTGGTTCCATTCCCACAAGCCTAGCTAGTATTCCTTCATTGAAAATTTTGGATGTTCACAACAATACACTTTCTGGGAATGTCCCTCCGGCTCTTAAGAGACTACATGATGGATTTTTATATGAACACAATATGGGGTTATGTGGAGTTGGGTTTCCATCCTTGAAAACTTGCAATACAAGCAAAGATGGATCATCAACAAAATATATCCCAGAAGCTGGAAATGTGAGTTTATCTTGCAATGGAAGTCAATGCCTTCATTCATCAATATTCAATCAAGCCAAATCAATTATTGTTGGCATATCTGTGGTTATGATTTTAGTGTTGGCAATTGGTATTTTAATCTTCACTTTATATCTTCGTCGAAGAAAACAAAATCTGGAAAATTCTTTTCATATATCTGATAGCCGTCTAAGTACCGACGAAGCCAAGGGTATATACCGGAAAAATGAGTCTCCTTTGCCATGCCTTGAATACTCTACTAGATATGACCCTTTGGTGGATTATAGAGATTTCGACGGTGATAGCCAAGACAAGTTCCGTGGTTTCATGTTCAACTTGGAAGAGGTGGAGTTAGCCACTCAAAATTTCGCGGATTCGAATTTGTTAGGCAAGAATGAATTTTGTGCAACATATAAAGGTGTCTTAAGAGATGGATCTGTTGTTGCTGTGAAGAGCATTAACAAAAATAGTTGCAAGTATGATGAAGAAGAGGTTATGAAGATATTGAATAGTTTGGCATCAATGAGGAATGATAATTTAGTAATGTTGAGAGGATTTTGTTGTTCAAGAGAAAGAGATGAATGTTTTCTGATCTATGATTTTGTTCCTAATGGAAAATTGTCAAGTTTCCTTGATTTGCAAGAAAGTGATGAAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGCAAAAGGAATTGCTAAAGGTGTGGCATATTTGCATTCAAACAAACCTGTCATTATTCACCAAAACATCTCAAGTGAAAAAATTCTAATAGATCAGAGGTACAGTCCATTGTTGGATGATTATGGCCTGTACAAGCTTTTTACAAATGATATTGTCTTTTCTGCACTTAAAGCTAGTGCAACAAAGGGTTACATGGCTCCCGAATACACAACTACCGGTCGGTTTTCGGAGGCAAGTGATGTTTATGCTTTTGGAATGGTGCTTTTACAAATCCTTTCAGGGAAGAAAGAGATAACTAGCTCAATAAGACTTGCTGCAGAGTCCTTCAATTTCAAGGAATTTATTGATCCAAATCTTAATGGAAGATTCTTTGAGTGTGATGCAGCTAAATTGACAAAAATAGCTTTGTTTTGCATGCATGAGTCTCCATTTGAGAGGCCATGTATGGAAGCAATTGTTAAAGAATTGAGCAATTGTACTAGTTGTCTATGA 1854 0.3635 MAMKASLDPKNHFLPSWTINGDPCGESFEGVACNEKGQVVNISLQGKGLSGKLSSSIVGLKHLKGLYLHYNSLYGEIPREVSNLTQLGELYLNVNQFYGEIPFEIGSMENLQVLQLSYNQLTGSIPTQIGALKNLGDLDMLVRLDLSSNNLIGSIPTSLASIPSLKILDVHNNTLSGNVPPALKRLHDGFLYEHNMGLCGVGFPSLKTCNTSKDGSSTKYIPEAGNVSLSCNGSQCLHSSIFNQAKSIIVGISVVMILVLAIGILIFTLYLRRRKQNLENSFHISDSRLSTDEAKGIYRKNESPLPCLEYSTRYDPLVDYRDFDGDSQDKFRGFMFNLEEVELATQNFADSNLLGKNEFCATYKGVLRDGSVVAVKSINKNSCKYDEEEVMKILNSLASMRNDNLVMLRGFCCSRERDECFLIYDFVPNGKLSSFLDLQESDEEVLEWSTRVSIAKGIAKGVAYLHSNKPVIIHQNISSEKILIDQRYSPLLDDYGLYKLFTNDIVFSALKASATKGYMAPEYTTTGRFSEASDVYAFGMVLLQILSGKKEITSSIRLAAESFNFKEFIDPNLNGRFFECDAAKLTKIALFCMHESPFERPCMEAIVKELSNCTSCL 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03426 617 PANTHER LEUCINE RICH REPEAT KINASE 2 33 139 - -
Trre2g03426 617 Pfam Leucine rich repeat N-terminal domain 2 34 IPR013210 -
Trre2g03426 617 Pfam Protein tyrosine and serine/threonine kinase 353 610 IPR001245 GO:0004672|GO:0006468
Trre2g03426 617 Gene3D Transferase(Phosphotransferase) domain 1 428 616 - -
Trre2g03426 617 SUPERFAMILY L domain-like 7 186 - -
Trre2g03426 617 Gene3D Ribonuclease Inhibitor 138 213 IPR032675 -
Trre2g03426 617 FunFam Protein NSP-INTERACTING KINASE 2 320 426 - -
Trre2g03426 617 SUPERFAMILY Protein kinase-like (PK-like) 332 610 IPR011009 -
Trre2g03426 617 Gene3D Ribonuclease Inhibitor 1 137 IPR032675 -
Trre2g03426 617 Gene3D Phosphorylase Kinase; domain 1 325 426 - -
Trre2g03426 617 ProSiteProfiles Protein kinase domain profile. 348 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03426 617 FunFam Protein NSP-INTERACTING KINASE 2 1 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03426 Trre-Chr2 31621204 31625130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03426 1 461 Miscellaneous Gene Families AT4G22730 50.996 1.62e-158 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Trre2g03426 PK_Tyr_Ser-Thr 5.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03426 - - gmx:100775422 878.241