Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03361 ATGAAATATGTAAGAAAAGGAAAGAAGATTCAAGAAAAGCCGAAGCAGCTGCAAGAAGAATTACCTATCACTCCACAAGCACCAAAAGCTCCTGCTTCTGAACTTTCTGTTGTAGAAGATGTTAAGAAAGATGTGAAACAACAAGGTGGAATAGAAATTTTGGATGAAGTTTCTACCATTTTATCAGCTAGAAGAGCAAAAATTGCAGCTAGAAAAAAGTTTATCAGAACTGAACTAACTCCTACTGCTCAACCTGACAAAGTCACAGTTGATGAGAAGAAAGACGATATGCGCCCCTGGCTTGAAACAGTCACTGAGACTCCAAAAATCAGATTTAAGAATTCTTCAAAACCAGAATCATCAAGTCAGAAAATAGTGTTCAAGAATGTTTCAAGGGACAATGCTGAATCATTGAAAGAAAAAGCTGTTATGTGTGAGCCATTGAATTGCTTGGTGGAAACTACAAAGAAAAACAATTCTCCTAATAACTCAACCATGCAAGAAAACGGTATCATCCCAATGCTTGTGGATTCTAGTGACAATGACTCTCATCATGTGACAAAGTTTGAAGTTAAGAATCATTGTAATAACCACCAAACAGAATTAGAAGATAATCAAAATGATCCAAAATCATCTTCCTTGAAGTTTAAGCTTAAAAGAGTGGAAGAAAAAAGAGTAAAATTTTTTGAGGACTTGAATCTTCCAGCACTACCTGAAAATGAAAGCAAGGAAGATTTTGGTTCTTTCTGGTTCTCCTTAGTTGCTTCCAAAGAACAGGAACTTGGTGCACTGCCACAAATATCTTCTCCCTACTTAAGGGTCAAGGATGGAAGTTTACCTGTTTCACATATCAAAAAGTATATTGTAAAGAAGCTTAATCTTGCTAATGAAGCTGAGGTGGAGATTTTATTAGAAGGTAAGCCAGTTTTATGTTCAATGAAATTGCAAAACTTAATGGAAATGTGGTTGGAAACAATGTCAAAGAATGAAAGGGTTGAAACATCTGTTGGAAGCTCAGCTAAGGATTTTGTTATGGTCCTTTCGTACCGTCGAAAGGCTTGA 1062 0.3616 MKYVRKGKKIQEKPKQLQEELPITPQAPKAPASELSVVEDVKKDVKQQGGIEILDEVSTILSARRAKIAARKKFIRTELTPTAQPDKVTVDEKKDDMRPWLETVTETPKIRFKNSSKPESSSQKIVFKNVSRDNAESLKEKAVMCEPLNCLVETTKKNNSPNNSTMQENGIIPMLVDSSDNDSHHVTKFEVKNHCNNHQTELEDNQNDPKSSSLKFKLKRVEEKRVKFFEDLNLPALPENESKEDFGSFWFSLVASKEQELGALPQISSPYLRVKDGSLPVSHIKKYIVKKLNLANEAEVEILLEGKPVLCSMKLQNLMEMWLETMSKNERVETSVGSSAKDFVMVLSYRRKA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03361 353 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 57 352 IPR044807 GO:0004842
Trre2g03361 353 MobiDBLite consensus disorder prediction 1 35 - -
Trre2g03361 353 Gene3D - 199 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03361 Trre-Chr2 30655882 30657878 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03361 264 352 C3H Transcription Factor Family AT3G23060 44.944 4.02e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03361 K16277 - lja:Lj5g3v1204350.1 211.075