Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03352 ATGAAGAAATTGTGGCTTTCTATTTCTCATTTATTTCCTACACTCATTTTTCTTTTACTTATTCCAACTTCATTTGCACAATTAACACAAACTGAAACTAGAATTCTTTTACAAGTTCAGAAGCTTCTAGAATATCCACAAGTTCTTCAAGGATGGAACAATTGGACAAACTTCTGCTTCCTTCCGCCGTCCTCTTCGGTCAAAATAGTTTGTTCGAACGGTCACATAACCGAATTAACTGTCGTTGGAAACAGAACTTCTCCGTCTTCGCATAGTTCTAAACCTTTTCAAGCACTTTCCGGAACTTTCTCAACCGATTCATTTTTCACCGTTATGACAAAGCTTTCAAATTTGAAGGTTTTGTCATTAGTTTCAGTAGGATTATGGGGTCCATTACCGGAAAAAATCAACCGGTTTTCGTCTCTCGAAGTATTGAACGTTAGTTCGAATTTCATTTCCGGTGAAATTCCGACTTCAATATCTTCAATGAAAAATTTGAAGAGTATTGTTTTGGCTGATAATCTTTTCATTGGAAATATTCCAGATCTCAAAAGTTTAACTTCTCTTGAAGAGGTTAATTTTGATGGAAACAAATTAGGTCCTCAATTTCCTTCACTAGGAAAAAATCTTGTGAAAATTATCTTGAGTAAAAATTCTATAAGATCTCAAATTCCTCCTCAGTTTATTATACACTTTAATAAGCTTCAAATATTTGATATTTCTTCAAATAATTTTGTTGGAAAAATTCCATTTTCTATGTTTTCTTTACCTTCACTTCATTACCTAGATTTGTCTTCAAACAAATTTAGTGGAAATCTTTCAATGAATTTACCTTGTAGTTCATCATTGAATTATGTTGATATTTCACATAATTTTCTAGTAGGAAAATTACCATCATGCATAATTAAATCAAAGGCTAAAGTATTGTATATTTGGAATTGTTTATCAACAAAAAAGTTGAATGATCAACAACATGGTATTTCATATTGTAAAAAAGATGCAGCTTTAGCAGTTAAGCCTCTTAAAACAAAGGTGAAGAAGGAATCAAGTATGAAATTGGGTCTTGTGCTTGTTATTGTTGGAGGTGTTGTTGGAATTGCATGTGTTTTGATTCTGCTTATTGTGTTCATCTTGTGGAAATCCAAACCAGAAAGATTGAATCATAATATGGATAGATCTGCTGCTAACAAGTTTTCAGATAAATCAAATTTGAATGCAAGACATGTTCCTCAAACAATGAGGCAAGCTACACATGGACAACCACCATACAATATTTTCACAGAAGAAGAAATTGAAGATGCAACAAATAACTTTGACCAATCAAATCTAATAGGAGAAGGGTCACAAGGACAGATATATAAAGGTTGGTTAAGAGATGGTTCAGTGGTCCTGATTAATTGCATAAAAATAAAGCAAAAGGGTTTACCGCACAGCATTATGCAACACTTAGATGTATTACAAAATTTGAGGCATAGGCATATGGTGAGTGTTCTAGGACATTGTATTATTATTCATCAGGATCCTCCTCAAGTAACAAGCACAGTCTTCATTGTACTTGAATACATTTCAAATGTAACATTGAGGGATCAACTCACAGATGGGAAAAAGAAGGAAATACTGAAATGGCCACAAAGAATGGCAATAAGCATTGGGATTGCAAGAGGAGTTCAGTTCTTACACACAGGAGTTGCTCCTGGAATATTTGGCAACAATTTAAAGATTCAGAATATTTTGTTGGATGATAGTCTTAATGCTAAAGTCAGTGGATACAGAATTCCATTACCATCCAAGAGCACAGTTAATGAACAAAGTGCCACCAATCAAATTGCCAGCACAAGTAATGCAGAAAAAGAAGATATTTATCAGCTTGGTGTTATTCTACTTGAAGTCATTACTGGTACACAAATTGCATCCCCTAGTGATGTAGAGCAGCTCAAGGATGAGCTGGAAAGAGGTTCATCAGAAGCACCATCAACAATACTAAGAAGTGCAATTGATCCATCATTGAGAGGAAGTTATGCATATGAATCAATGAGTACTGCAGTTCAAATTACCATCAATTGTCTCTCTAAGGTATCTAGTACACGTCCTTCCATAGAGGATGTTCTTTGGAATTTACAATATTCAATGCAAGTTCAAGAGAATTGGACTAGCAGTGGGAACCTCAGCACAAAATTCTAA 2181 0.3425 MKKLWLSISHLFPTLIFLLLIPTSFAQLTQTETRILLQVQKLLEYPQVLQGWNNWTNFCFLPPSSSVKIVCSNGHITELTVVGNRTSPSSHSSKPFQALSGTFSTDSFFTVMTKLSNLKVLSLVSVGLWGPLPEKINRFSSLEVLNVSSNFISGEIPTSISSMKNLKSIVLADNLFIGNIPDLKSLTSLEEVNFDGNKLGPQFPSLGKNLVKIILSKNSIRSQIPPQFIIHFNKLQIFDISSNNFVGKIPFSMFSLPSLHYLDLSSNKFSGNLSMNLPCSSSLNYVDISHNFLVGKLPSCIIKSKAKVLYIWNCLSTKKLNDQQHGISYCKKDAALAVKPLKTKVKKESSMKLGLVLVIVGGVVGIACVLILLIVFILWKSKPERLNHNMDRSAANKFSDKSNLNARHVPQTMRQATHGQPPYNIFTEEEIEDATNNFDQSNLIGEGSQGQIYKGWLRDGSVVLINCIKIKQKGLPHSIMQHLDVLQNLRHRHMVSVLGHCIIIHQDPPQVTSTVFIVLEYISNVTLRDQLTDGKKKEILKWPQRMAISIGIARGVQFLHTGVAPGIFGNNLKIQNILLDDSLNAKVSGYRIPLPSKSTVNEQSATNQIASTSNAEKEDIYQLGVILLEVITGTQIASPSDVEQLKDELERGSSEAPSTILRSAIDPSLRGSYAYESMSTAVQITINCLSKVSSTRPSIEDVLWNLQYSMQVQENWTSSGNLSTKF 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03352 726 Pfam Leucine rich repeat 209 269 IPR001611 GO:0005515
Trre2g03352 726 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 522 722 - -
Trre2g03352 726 Gene3D Ribonuclease Inhibitor 208 345 IPR032675 -
Trre2g03352 726 Gene3D Ribonuclease Inhibitor 28 207 IPR032675 -
Trre2g03352 726 Gene3D Phosphorylase Kinase; domain 1 395 509 - -
Trre2g03352 726 SUPERFAMILY L domain-like 34 317 - -
Trre2g03352 726 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 346 715 - -
Trre2g03352 726 SUPERFAMILY Protein kinase-like (PK-like) 417 706 IPR011009 -
Trre2g03352 726 Pfam Protein kinase domain 439 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03352 726 Gene3D Transferase(Phosphotransferase) domain 1 522 721 - -
Trre2g03352 726 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 411 511 - -
Trre2g03352 726 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 29 208 - -
Trre2g03352 726 ProSiteProfiles Protein kinase domain profile. 438 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03352 Trre-Chr2 30550870 30554981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03352 24 640 Miscellaneous Gene Families AT2G02780 48.137 6.44e-180 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Trre2g03352 Pkinase 1.4e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03352 - - cam:101490224 1113.21