Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03343 ATGAGAGTGAATGTCATTAAAGATATAGCTAATGCTTTATGTTATATGCATTATGATTGCTCACCTGTAATTGTTCATCGCGATATATCTAGCAAGAATGTTGTTTTGGATTTGGAATATGTAGCTCATGTCTCAGACTTCGGCACAGCTAAGTTTCTAAATCCCGACTCATCCAACTGGACCAATTTTGTAGGAACATTTGGATATACTGCTCCAGAACTTGCATACACAATGGAAGTAAATAAGAAATGCGATGTGTATAGTTTTGGAGTATTAACCTTAGAAATACTTCTTGGAAAACACCCTAGAGATATTGTATCAAATTTTTTGTATGGTGGTGTGTGCCTAACACCTGATGGTATGTCATTGATTGATAACTTGGATCAACGTCTTTCTCATCCTACAAATGTTATCATGAAAGAAGTGGTTTGCAAGGAGTTTGTAACTTTAAAGTAA 456 0.3509 MRVNVIKDIANALCYMHYDCSPVIVHRDISSKNVVLDLEYVAHVSDFGTAKFLNPDSSNWTNFVGTFGYTAPELAYTMEVNKKCDVYSFGVLTLEILLGKHPRDIVSNFLYGGVCLTPDGMSLIDNLDQRLSHPTNVIMKEVVCKEFVTLK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03343 151 SMART serkin_6 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03343 151 PANTHER LEUCINE RICH REPEAT KINASE 2 2 143 - -
Trre2g03343 151 ProSitePatterns Tyrosine protein kinases specific active-site signature. 24 36 IPR008266 GO:0004672|GO:0006468
Trre2g03343 151 Gene3D Transferase(Phosphotransferase) domain 1 1 145 - -
Trre2g03343 151 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03343 151 Pfam Protein kinase domain 4 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre2g03343 151 SUPERFAMILY Protein kinase-like (PK-like) 2 114 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03343 Trre-Chr2 30405797 30406434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03343 2 139 Receptor kinase-like Gene Family AT1G75820 42.143 6.96e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre2g03343 Pkinase 3.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03343 - - tpra:123922968 235.343