Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03318 ATGAAGTTTGATACGGAAGATCACGCATATAGATTTTATAATGTATATGCTGGCTTTGCTGGTTTTAGCATTAGAAAAGATTGGAGAAACAAAAGCAAATTAGATAAAAAGACAGTGATGTCTCGAAAGTTTGTGTGTTTTAAAGAAGGCTTCAAGAAGATCAAAGAATATGATGATAAAGTGTCTCGTAAAGATATCAGAACTGGATGTTTAGCACATGTTGTCATCGGTCGGGAATTGAGTGGAAACTATGTTGTTACATCTTTCGTAAAAGACCATAATCATGAGCTTGCATCCCCTAGAAGTAAGCATAAATTACCATCACAAAGGAGGGTTTCTGCCGCTCAAGCAGCTGAGGTAGAAATGGCAAACCGATCTGGTATACGCCAAAAATTGATTTTTGAGTTTATAAGTCAACACGTTGGAGGGAGGGAGAATGTTGGTTGCACTTCTAAAGATATTAGCAATCATTTAACTGCCAAGAGGATGAAGGAAATGAAGGAAGCACTGTTATATGATGAAACTGCTGCATCATTTGAGTGGTTGTTCAAGACTTTTCTTAAGGCAATGTGTGGAAAGAAGCCGAAGACAATTTTCACAGATCAAGATCCTGCCATGGCAAAAGCAATATCAGAAGTTTTTCCTGAAACATATCATCTCGGAATATCAAGCAAGGCTGCTGAATCTGGAGAAGCTTCAGCATTTTTAGCAAGAAAATTGATGGAAGCTGACATTGAAGTTGATAAAATCTTAAGCAAAAGATCTTCCACACAAACAACAAATATTGGTGATGTAAATAGTCAAACCAATGAGATAGTAACAGATGATATTACAACTGCATCACAAGCCATTGGTATAAAAAAGAAAGATGGTACATCACGGTTAAAAGGCAGACCAAAGAGTTGTGTGGAGAAAAAATACAAAAGATGCAAAGGCACTCCCAAGTGTAGTTCTGTGACACAAAATTATTCAACCACGTCCATGCCAATTATGCAGAATTTTCCATTTTCACATAGATACCAAGAACTAGTAGTAGCTGGTATTAATACAACACAGTTTAATGACAAGAATAAGGAAAATGGAGAACACATGGAAGAATTTGGTTTTTCTACTTATGCTTATCAAGGGCAAGAACATCTAAGTCAAAGTCCGGTGTTGAACTCAACGAATGTAGAGCTTGAGGAACCATCTGCAGAGCTTCAACCAAGTCCTTCGGAATTTAACCAACATGATGGCTTAACATCTTGGGAAGGAAACAAGGAAACCAACTAA 1272 0.3719 MKFDTEDHAYRFYNVYAGFAGFSIRKDWRNKSKLDKKTVMSRKFVCFKEGFKKIKEYDDKVSRKDIRTGCLAHVVIGRELSGNYVVTSFVKDHNHELASPRSKHKLPSQRRVSAAQAAEVEMANRSGIRQKLIFEFISQHVGGRENVGCTSKDISNHLTAKRMKEMKEALLYDETAASFEWLFKTFLKAMCGKKPKTIFTDQDPAMAKAISEVFPETYHLGISSKAAESGEASAFLARKLMEADIEVDKILSKRSSTQTTNIGDVNSQTNEIVTDDITTASQAIGIKKKDGTSRLKGRPKSCVEKKYKRCKGTPKCSSVTQNYSTTSMPIMQNFPFSHRYQELVVAGINTTQFNDKNKENGEHMEEFGFSTYAYQGQEHLSQSPVLNSTNVELEEPSAELQPSPSEFNQHDGLTSWEGNKETN 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03318 423 Pfam FAR1 DNA-binding domain 11 98 IPR004330 -
Trre2g03318 423 MobiDBLite consensus disorder prediction 391 423 - -
Trre2g03318 423 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 220 IPR031052 GO:0006355
Trre2g03318 423 Pfam MULE transposase domain 168 220 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03318 Trre-Chr2 30149409 30152074 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Trre2g03318 FAR1 1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03318 - K17604 tpra:123914859 330.872