Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03316 ATGGCTAGCAATAATATTATTGCATGCACATTGTGCAGCCAAATTTTTACAAACACTCAAGAACTCATAACTCATATGGAGTCTCATAGGCTTCAAGAAAACCTTGCTTTATTAAGGCTAAACAACATTAACAACCCTCACTTTCAGGCTCAGATTGAACAAATTCCCAACCCTCTCCAAGTACTACCACAACAACCATTGGCAATGCCTCAGCCAAGAACAAACCAAATTATGGACAGTGTTACACATCAACTCCATATTTTACAAAATGTTATACCTTCTGCTGAGACAAATGTTGCTGAAATGACATTAATGTCACCAACTCCACCAGCCCACCAAAATTATATGGAAGTTTCTCAAATTGATGGAACTAAACCATATATTGACATGCTAGATAAACCAATCAATAGCATGTTTGTTAATCCTCCTCCTATTGTCAATGATGACACATTGGATTTGGAATTAAAGCTCTGA 474 0.3671 MASNNIIACTLCSQIFTNTQELITHMESHRLQENLALLRLNNINNPHFQAQIEQIPNPLQVLPQQPLAMPQPRTNQIMDSVTHQLHILQNVIPSAETNVAEMTLMSPTPPAHQNYMEVSQIDGTKPYIDMLDKPINSMFVNPPPIVNDDTLDLELKL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03316 157 ProSitePatterns Zinc finger C2H2 type domain signature. 9 29 IPR013087 -
Trre2g03316 157 ProSiteProfiles Zinc finger C2H2 type domain profile. 7 34 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03316 Trre-Chr2 30137024 30137497 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre2g03316 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03316 - K20210 pvu:PHAVU_007G056300g 79.7221