Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03308 ATGAAGAAAACTTATCTTGGTGTAAGGTCAAAGATGAGAGAAGAACAAAGATATGAAGATACATGTAGAATGAGCTCAGCATCTGTAATGGTAATCAATGGAGAAAAACTTGTAATAGCTAATATAGGAAATTACAGAGTTGTTGTGTGTAGAGATGGAATGGCTCATCAGAAAGCTGGCATATACCAACAATCAGCCAAAAGACACTGGTCTCGTAGAATATTTTCAGCATATGAATCAGGACATGAAGTAGCTACAAGGCATTCTAGTAGCTCAGAACTTGTCATCAGAAGTGAAAGTATTGATTCTGATACTGAATTATTGATATTAGCAAGTAATGGTATATGGGAGAATCAAGAGGCTGTGAATCTAATAAGTCACATAGAAGATCCACAAGAAGCAGCTGAATGTTTGGCAAATGAAACTCTAAATAGAATGAGCAAAAGAAATATTTCATGCTTAATCATTCACTTTGACTGA 480 0.35 MKKTYLGVRSKMREEQRYEDTCRMSSASVMVINGEKLVIANIGNYRVVVCRDGMAHQKAGIYQQSAKRHWSRRIFSAYESGHEVATRHSSSSELVIRSESIDSDTELLILASNGIWENQEAVNLISHIEDPQEAAECLANETLNRMSKRNISCLIIHFD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03308 159 ProSiteProfiles PPM-type phosphatase domain profile. 1 158 IPR001932 -
Trre2g03308 159 CDD PP2Cc 1 158 IPR001932 -
Trre2g03308 159 Gene3D - 1 69 IPR036457 -
Trre2g03308 159 PANTHER PROTEIN PHOSPHATASE 21 157 IPR015655 GO:0004722|GO:0006470
Trre2g03308 159 Pfam Protein phosphatase 2C 94 151 IPR001932 -
Trre2g03308 159 SUPERFAMILY PP2C-like 5 159 IPR036457 -
Trre2g03308 159 Gene3D - 70 159 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03308 Trre-Chr2 29967861 29968710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03308 6 158 PP2C-type Phosphatase Gene Family AT3G23360 51.250 2.75e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03308 K19704 - gmx:100785227 226.483