Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03307 ATGATGAAGAAAACTTATCTTGGTGTAAGGTCAAAGATGAGAGAAGAACAAAGATATGAAGATACATGTAGAATGAGCTCAGCATCTGTAATGGTAATCAATGGAGAAAAACTTGTAATAGCTAATATAGGAAATTACAGAGTTGTTGTGTGTAGAGATGGAATGGCTCATCAGAAAGCTGGCATATACCAACAATCAGCCAAAAGACACTGGTCTCGTAGAATATTTTCAGCATATGAATCAGGACATGAAGTAGCTACAAGGCATTCTAGTAGCTCAGAACTTGTCATCAGAAGTGAAAGTATTGATTCTGATACTGAATTATTGATATTAGCAAGTAATGGTATATGGGAGAATCAAGAGGCTGTGAATCTAATAAGTCACATAGAAGATCCACAAGAAGCAGCTGAATGTTTGGCAAATGAAACTCTAAATAGAATGAGCAAAAGAAATATTTCATGCTTAATCATTCACTTTGACTGA 483 0.3499 MMKKTYLGVRSKMREEQRYEDTCRMSSASVMVINGEKLVIANIGNYRVVVCRDGMAHQKAGIYQQSAKRHWSRRIFSAYESGHEVATRHSSSSELVIRSESIDSDTELLILASNGIWENQEAVNLISHIEDPQEAAECLANETLNRMSKRNISCLIIHFD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03307 160 CDD PP2Cc 2 159 IPR001932 -
Trre2g03307 160 Gene3D - 70 160 IPR036457 -
Trre2g03307 160 PANTHER PROTEIN PHOSPHATASE 22 158 IPR015655 GO:0004722|GO:0006470
Trre2g03307 160 SUPERFAMILY PP2C-like 3 160 IPR036457 -
Trre2g03307 160 ProSiteProfiles PPM-type phosphatase domain profile. 1 159 IPR001932 -
Trre2g03307 160 Gene3D - 1 69 IPR036457 -
Trre2g03307 160 Pfam Protein phosphatase 2C 20 59 IPR001932 -
Trre2g03307 160 Pfam Protein phosphatase 2C 94 152 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03307 Trre-Chr2 29967858 29968710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03307 7 159 PP2C-type Phosphatase Gene Family AT3G23360 51.250 2.45e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03307 K19704 - gmx:100785227 226.483