Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03305 ATGAGAATCAGATATCTTCATATCAAGCTCAAGGCATTTAGGTTGAAAAGATTTCTGCTAAGATTTCTAAGCAGAAAAAGAAGGCTGATGCCAGCAAAGAAGCCTTCATGGATGACACCAATAACACATGGTTATCAAGTGGTGGAACATCATATGATAAGAGATGGTTCTGATTACTCAGACATTGATTCAATTGTGGTACAAAGAGAGCAAATGGATCAAACTGAATTGTGGTATTTTGGAATATTTGATCCATTAGTTGGAGACAAAGTTACCAAGTACATGCAATCTCATTTCTTTACAAAGAAGCTTCAAGAGGCTCAAATATGGAGAAAAAGCAAAGAAATGATGAAGAAAGCTTACCTTGGTGTAAGGTCAAAGATGAAAGAAGAACAAAGATATGAAGACACATGTAGAATGAGTTCAGCATCTGTTATGGTAATCAATGGAGAAAAACTTGTAATAGCTAATATAGGAAATTACAGAGTTGTTGTGTGTAGAGATGGAATGGCTCATCAGAAAGTTGACACATACCAACAATCGGCCAAAAGACATTGGTCTCGCAGAATATTTTCAGGAAATGAAGTAGCTGCAAGGCATTCTAGCAGCTCAGAACTTGTCATTAGAAGTGAAAGTATTGATTCTGATACTGAATTTTTGATATTAGCAAGTAATGGTATCTGGGAGGTGATGAAGAACCAAGAAGCTGTGAATCTAATAAGTCACATAGAAGATCCACAAGAAGCAGCTGAATGTTTGGCAAATGAAGCACTAAATAGAATGAGCAAAAGCAACATTTCATGCTTAATCATTCGCTTTGATTGA 825 0.36 MRIRYLHIKLKAFRLKRFLLRFLSRKRRLMPAKKPSWMTPITHGYQVVEHHMIRDGSDYSDIDSIVVQREQMDQTELWYFGIFDPLVGDKVTKYMQSHFFTKKLQEAQIWRKSKEMMKKAYLGVRSKMKEEQRYEDTCRMSSASVMVINGEKLVIANIGNYRVVVCRDGMAHQKVDTYQQSAKRHWSRRIFSGNEVAARHSSSSELVIRSESIDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLANEALNRMSKSNISCLIIRFD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03305 274 PANTHER PROTEIN PHOSPHATASE 62 272 IPR015655 GO:0004722|GO:0006470
Trre2g03305 274 CDD PP2Cc 63 273 IPR001932 -
Trre2g03305 274 SUPERFAMILY PP2C-like 65 274 IPR036457 -
Trre2g03305 274 SMART PP2C_4 40 271 IPR001932 -
Trre2g03305 274 Gene3D - 56 274 IPR036457 -
Trre2g03305 274 Pfam Protein phosphatase 2C 77 181 IPR001932 -
Trre2g03305 274 Pfam Protein phosphatase 2C 208 266 IPR001932 -
Trre2g03305 274 ProSiteProfiles PPM-type phosphatase domain profile. 59 273 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03305 Trre-Chr2 29952753 29954937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03305 6 273 PP2C-type Phosphatase Gene Family AT3G23360 50.183 3.47e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03305 K19704 - gmx:100785227 374.4