Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03304 ATGAGAATCAGATATCTTCATATCAAGCTCAAGGCATTTAGGTTGAAAAGATTTCTGCTAAGATTTCTAAGCAGAAAAAGAAGGCTGATGCCAGCAAAGAAGCCTTCATGGATGACACCAATAACACATGGTTATCAAGTGGTGGAACATCATATGATAAGAGATGGTTCTGATTACTCAGACATTGATTCAATTGTGGTACAAAGAGAGCAAATGGATCAAACTGAATTGTGGTATTTTGGAATATTTGATCCATTAGTTGGAGACAAAGTTACCAAGTACATGCAATCTCATTTCTTTACAAAGAAGCTTCAAGAGGCTCAAATATGGAGAAAAAGCAAAGAAATGATGAAGAAAGCTTACCTTGGTGTAAGGTCAAAGATGAAAGAAGAACAAAGATATGAAGACACATGTAGAATGAGTTCAGCATCTGTTATGGTAATCAATGGAGAAAAACTTGTAATAGCTAATATAGGAAATTACAGAGTTGTTGTGTGTAGAGATGGAATGGCTCATCAGAAAGTTGACACATACCAACAATCGGCCAAAAGACATTGGTCTCGCAGAATATTTTCAGCATATGAATCAGGAAATGAAGTAGCTGCAAGGCATTCTAGCAGCTCAGAACTTGTCATTAGAAGTGAAAGTATTGATTCTGATACTGAATTTTTGATATTAGCAAGTAATGGTATCTGGGAGGTGATGAAGAACCAAGAAGCTGTGAATCTAATAAGTCACATAGAAGATCCACAAGAAGCAGCTGAATGTTTGGCAAATGAAGCACTAAATAGAATGAGCAAAAGCAACATTTCATGCTTAATCATTCGCTTTGATTGA 837 0.3596 MRIRYLHIKLKAFRLKRFLLRFLSRKRRLMPAKKPSWMTPITHGYQVVEHHMIRDGSDYSDIDSIVVQREQMDQTELWYFGIFDPLVGDKVTKYMQSHFFTKKLQEAQIWRKSKEMMKKAYLGVRSKMKEEQRYEDTCRMSSASVMVINGEKLVIANIGNYRVVVCRDGMAHQKVDTYQQSAKRHWSRRIFSAYESGNEVAARHSSSSELVIRSESIDSDTEFLILASNGIWEVMKNQEAVNLISHIEDPQEAAECLANEALNRMSKSNISCLIIRFD 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03304 278 CDD PP2Cc 63 277 IPR001932 -
Trre2g03304 278 PANTHER PROTEIN PHOSPHATASE 62 276 IPR015655 GO:0004722|GO:0006470
Trre2g03304 278 Gene3D - 55 278 IPR036457 -
Trre2g03304 278 SMART PP2C_4 40 275 IPR001932 -
Trre2g03304 278 ProSiteProfiles PPM-type phosphatase domain profile. 59 277 IPR001932 -
Trre2g03304 278 SUPERFAMILY PP2C-like 65 278 IPR036457 -
Trre2g03304 278 Pfam Protein phosphatase 2C 212 270 IPR001932 -
Trre2g03304 278 Pfam Protein phosphatase 2C 77 184 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03304 Trre-Chr2 29952753 29954937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03304 6 277 PP2C-type Phosphatase Gene Family AT3G23360 50.183 5.83e-87 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03304 K19704 - gmx:100785227 382.104