Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03298 ATGGCTCCTACACCTTCCAAGCAAATGCATTCAACCCATTTGATAACTCCACGTTCAAAGCATCGAATCAATTTCAATGGCTACAAAGCAGCACCAACACCACCACATCCACATCCATCACCAAATCTCAATTTCAAAGAAACCCCTCATGAACACCCAATTGAAGTTATTGCTAGAATTCGCGACTACCCAGATCGAAAAGACAAGCCTTTATCAGTTCTTCAAGCGAGTTCTAACTCTAGATCTATTAGGGTTCGTGCTGATTTTGGGTATAGGGACTTTACCCTTGATGGGGTTTCTGTTTCTGAGGAAGACGAATTAGATTTGTTCTATAAGAAATTTGTTGAATCAAGGATCAATGGTGTTAAATTGGGAGATAAATGTACTATTATGATGTATGGACCGACTGGTTCTGGTAAGAGTCACACCATGTTTGGTTGTTCAAAGCAAGCTGGGATTGTTTATAGGGCTTTGAGGGATATTCTTGGTGATGGTGATACAGATTCTGAGGGTGATGGTGATTCTAAAGGAATGTGTGTTGGATTGAGAACTTTTGTTCAGGTTACTGTTTTGGAGATTTATAATGAAGAGATTTATGATCTTTTGTCCACCAATGGAGGAGGTGGTGGAGGTGGAGGGTTCGGATTCGGTTGGTCTAAGGGCAATGCTTCAAAGGTCAAACTCGAAGTGATGGGAAAAAAGGCTAAGAATGCAACCTATATATCTGGAAATGAAGCAGGGAAGATCTCAAAAGAAATTCAGAAAGTGGAGAAGCGGAGGATTGTTAAAAGCACACTTTGTAATGACAGGAGTTCTAGAAGTCACTGCATGGTGATACTCGATGTCCCAACAGTGGGAGGGCGTCTAATGCTTGTTGACATGGCAGGTTCAGAAAATATTGAACAAGCTGGTCAAACTGGATTTGAGGCAAAAATGCAGACTGCAAAAATTAATCAAGGAAATATAGCACTGAAGAGAGTGGTCGAGTCCATTGCAAATGGCGATTCACATGTTCCTTTTAGAGACAGCAAACTTACCATGCTTCTGCAGGATTCATTCGAAGATGATAAGTCAAAGATTCTAATGATACTATGTGCAAGTCCTGATCCTAAGGAGATACACAAGACAATCTCTACACTGGAATATGGAGCCAAAGCAAAATGTATAGTTCGTGGTCCTCATACCCCGGTTAAGGAGGAGGACTCTTCTTCTACAGTCATTTTGGGATCCAGAATTGCTGCAATGGATGAGTTTATCATGAAGCTACAAATGGAAAACAAACTAAGAGAGAAAGAGCGAAATGAAGCGCACAAAAAGCTCATGAAGAAAGAGGAAGAAATTGCTGAGTTAAGAGCTAAAATGGAAACAGCTCCTGCAAGTGAGGAGGAAATTAACCTGAAGGTAAACGAACGAACACGCCTTCTGAGACAAGAGTTGGAAAGGAAGTTGGAAGAGTGTCAAAGAATGACTAATGATTTTGTTGAGTTGGAGAGGAAGAGAATGGAAGAACGCATATTGCAGCAACAGGAGGAAGTTGAAATCCTGAGAAAGAGACTGGAAGAAATTGAGTTGCAGTTGCATTGTACTTCAAAGAAAGAGCATATCGATGAAAATGAATCAAAAGAGACGGAGCCAAGTGGGTTTATGAGAAAACTACTTCGTGTTTACAAAAGCGAGGATGATCCTGGAATGGTGAAATCGATGGATTTAGACATGGATGATCAAGAACCCTCCCTTGCACGTGAAGTTATTGTCGGCATGCAAGACATTTCACCAAATCAACCTTGTTCAATGAATGGTGTACAAGAAAATGCTTATGTTTGTGCACCAAACTTTGGTCAAAAAGCATGTCTAAGTACAGTATATGAAGAAGAAGGTGAAGGAGAACAAGATCATGAGGATAAAGTGGAAGAAGATGAGGAAGTAGAGAAAGAAGTGATAGAGGAAAAAAGGGTATGTAGTGTTAGCAAAAGTCCAAAGAGAGAAGATTATTCTTCTGAAGCTGACAAGGAAAATAATGGTTCCAACAGACTACTGAGGATTCATAACATATTCACTCTTTGTGGAAACCAAAGGGAACTCTCCCAATATGGAACTCCAATCCCTACAAAAAAGAGGTCTGATGAAGGTTTTGATTTTGATCTCAAATATTCTCCTTTGAAATCAAGTGAGAAGAAAGATTCTGTCTTAAGAATGTCCAACAAAGAGAACATGGAACAATATGTTGTTGGAAATTAG 2238 0.3986 MAPTPSKQMHSTHLITPRSKHRINFNGYKAAPTPPHPHPSPNLNFKETPHEHPIEVIARIRDYPDRKDKPLSVLQASSNSRSIRVRADFGYRDFTLDGVSVSEEDELDLFYKKFVESRINGVKLGDKCTIMMYGPTGSGKSHTMFGCSKQAGIVYRALRDILGDGDTDSEGDGDSKGMCVGLRTFVQVTVLEIYNEEIYDLLSTNGGGGGGGGFGFGWSKGNASKVKLEVMGKKAKNATYISGNEAGKISKEIQKVEKRRIVKSTLCNDRSSRSHCMVILDVPTVGGRLMLVDMAGSENIEQAGQTGFEAKMQTAKINQGNIALKRVVESIANGDSHVPFRDSKLTMLLQDSFEDDKSKILMILCASPDPKEIHKTISTLEYGAKAKCIVRGPHTPVKEEDSSSTVILGSRIAAMDEFIMKLQMENKLREKERNEAHKKLMKKEEEIAELRAKMETAPASEEEINLKVNERTRLLRQELERKLEECQRMTNDFVELERKRMEERILQQQEEVEILRKRLEEIELQLHCTSKKEHIDENESKETEPSGFMRKLLRVYKSEDDPGMVKSMDLDMDDQEPSLAREVIVGMQDISPNQPCSMNGVQENAYVCAPNFGQKACLSTVYEEEGEGEQDHEDKVEEDEEVEKEVIEEKRVCSVSKSPKREDYSSEADKENNGSNRLLRIHNIFTLCGNQRELSQYGTPIPTKKRSDEGFDFDLKYSPLKSSEKKDSVLRMSNKENMEQYVVGN 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03298 745 Coils Coil 469 532 - -
Trre2g03298 745 MobiDBLite consensus disorder prediction 624 672 - -
Trre2g03298 745 Coils Coil 426 453 - -
Trre2g03298 745 PRINTS Kinesin heavy chain signature 288 306 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g03298 745 PRINTS Kinesin heavy chain signature 338 359 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g03298 745 PRINTS Kinesin heavy chain signature 125 146 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g03298 745 PRINTS Kinesin heavy chain signature 265 282 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g03298 745 MobiDBLite consensus disorder prediction 645 672 - -
Trre2g03298 745 SMART kinesin_4 51 397 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g03298 745 ProSiteProfiles Kinesin motor domain profile. 53 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trre2g03298 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 396 IPR027417 -
Trre2g03298 745 PANTHER KINESIN-RELATED 56 665 IPR027640 GO:0003777|GO:0007018
Trre2g03298 745 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 35 394 - -
Trre2g03298 745 MobiDBLite consensus disorder prediction 1 21 - -
Trre2g03298 745 Gene3D Kinesin motor domain 38 392 IPR036961 -
Trre2g03298 745 MobiDBLite consensus disorder prediction 624 644 - -
Trre2g03298 745 MobiDBLite consensus disorder prediction 724 745 - -
Trre2g03298 745 Pfam Kinesin motor domain 76 389 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03298 Trre-Chr2 29928048 29931281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03298 108 399 Calmodulin-binding Proteins AT5G65930 28.155 1.01e-25 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03298 - K10398 gmx:100779567 1035.79