Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03232 ATGGCAGGACAACTAGGAGTGCTTAATGCACTCGATGTGGCGAAAACACAAATGTACCATTTCACAGCAATTGTGATTGCTGGAATGGGTTTTTTCACTGATGCTTATGATCTCTTCTGCATTTCCCTTGTCACAAAATTGTTAGGAAGAATCTATTACACAGATTACACTAAACCAAAGCCAGGTGTTCTTCCTCCTGGTGTACAAGCCGCTGTAACCGGTGTCGCGCTAGTTGGCACTTTAACAGGCCAACTGTTTTTCGGTTGGCTTGGTGACAAATTAGGAAGAAAAAAAGTTTACGGTATAACCCTTATGCTTATGGTAGGTTGTTCACTCGCCTCGGGTTTATCTTTTAGTAATAGTCCAAAGGGTGTTATGGCAACACTTTGTTTCTTTAGGTTTTGGCTTGGTTTTGGTATTGGTGGTGATTACCCACTTTCGGCCACAATTATGTCTGAATATGCGAACAAAAAGACACGAGGCGCTTTCATTGCTGCTGTGTTTGCTATGCAAGGATTTGGAATCATGGCTGGTGGAATAGTTGCATTGATTGTAGCTACTGCTTTTGATCACAAATATAAAGTTCCTAGTTATGAAGAAAACGCGCACGCGTCACTTGTGTTACCGGCTTTTGATTACGTTTGGCGTATTATTCTAATGTTCGGTGCAGTTCCAGCAGCACTTACTTATTACTGGCGTATGAAGATGCCGGAGACGGCTCGTTACACAGCACTTGTTGCTAAGAATGCTAAACAAGCAGCTTCTGATATGTCTAAGGTGTTACAAGTTGAACTTGAAGTTCAAGAGGTAGTTGAGGATAAGACTCAAAAGTTTGGTCTTTTTACCAAGCAATTCGCGAAACGTCACGGTATGCACTTGTTGGGAACAACTTCTACTTGGTTCTTGTTGGACATTGCTTTCTATAGTCAGAATCTTTTCCAAAAGGACATTTTCACCGCCATTGGATGGATCCCTCCGGCAAAAGAAATGAACGCAATCCACGAACTTTATAGGATTGCAAGAGCACAAACACTTATAGCAATGTGCAGTACTGTGCCAGGTTACTGGTTTACAGTGGCGTTTATCGATTACATGGGTCGATTCGCGATCCAATTGATGGGTTTCTTCTTCATGACCGTCTTCATGTTCGCTCTTGCTATACCTTACGATCACTGGACTAAAAAAGAAAACAGAATCGGATTTGTTGTGATGTACTCATTAACTTTCTTTTTCGCCAATTTTGGTCCAAATGCTACAACATTTGTTGTTCCAGCCGAGATTTTCCCTGCAAGGCTGAGATCCACCTGTCATGGAATATCGGCTGCTGCAGGAAAAGCGGGAGCAATTGTTGGTGCATTTGGTTTCTTATATGCTGCACAAAGTAAAGATCCAACTAAGACCGATGCAGGTTACCCTACCGGTATTGGAATTAAGAACTCGCTTATTATGCTTGGTGTTGTTAACTTCTTTGGAATGGTATTCACCTTCTTAGTACCTGAACCAAATGGAAAATCATTGGAAGAGATGAGTGGTGAGAATGAAGAAGATGATGCTGAGGCTATTGAGATGGCAGGGTCAGGAACTGCTAGGACAGTACCAGTTTAA 1605 0.4199 MAGQLGVLNALDVAKTQMYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTDYTKPKPGVLPPGVQAAVTGVALVGTLTGQLFFGWLGDKLGRKKVYGITLMLMVGCSLASGLSFSNSPKGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIMAGGIVALIVATAFDHKYKVPSYEENAHASLVLPAFDYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEVQEVVEDKTQKFGLFTKQFAKRHGMHLLGTTSTWFLLDIAFYSQNLFQKDIFTAIGWIPPAKEMNAIHELYRIARAQTLIAMCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDAGYPTGIGIKNSLIMLGVVNFFGMVFTFLVPEPNGKSLEEMSGENEEDDAEAIEMAGSGTARTVPV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03232 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 503 IPR020846 GO:0022857
Trre2g03232 534 CDD MFS_PhT 24 501 - -
Trre2g03232 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 501 - -
Trre2g03232 534 FunFam Inorganic phosphate transporter 1-6 19 523 - -
Trre2g03232 534 SUPERFAMILY MFS general substrate transporter 12 510 IPR036259 -
Trre2g03232 534 Gene3D MFS general substrate transporter like domains 19 525 IPR036259 -
Trre2g03232 534 Pfam Sugar (and other) transporter 24 510 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trre2g03232 534 NCBIfam phosphate:H+ symporter 10 512 IPR004738 GO:0005315|GO:0006817|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03232 Trre-Chr2 28987412 28989016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03232 1 517 Inorganic Solute Cotransporters AT3G54700 80.925 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03232 K08176 - gmx:100780201 912.138