Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03218 ATGATGGAGAAAGCAATGGTGGTGTTGAATAGTTTAGCAGGAATTGAAGAAGTTAAGGAAGCTATTGTTGAAGAAGGTGGAATAGCTGCTCTTGTTGAAGCCATTGAAGATGGGTCTGTGAAAGGAAAGGAATTTGCGGTTTTAACTCTTCTTCAGCTTTGTTCTGAGAGTGTTACAAACGGAGGGTTACTTGTTAGAGAAGGTGGAATTCCTCCTCTTGTAGCTCTTTCTCAGAATGGAACTCTTCGAGCTAAGCATAAGGCTGATACGCTCCTTCGATACTTGAGAGAATCAAGACAAGAAGCATCAACTTCGACCATAAAGCTTGTAACACTCTAG 339 0.413 MMEKAMVVLNSLAGIEEVKEAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCSESVTNGGLLVREGGIPPLVALSQNGTLRAKHKADTLLRYLRESRQEASTSTIKLVTL 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03218 112 SUPERFAMILY ARM repeat 2 105 IPR016024 -
Trre2g03218 112 PANTHER U BOX DOMAIN-CONTAINING 1 96 - -
Trre2g03218 112 Gene3D - 1 109 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03218 Trre-Chr2 28598869 28599792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03218 1 100 U-box Gene Family AT5G67340 55.000 3.17e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03218 - - tpra:123898555 189.889