Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03199 ATGATCTTAGCCCAAGTGGGCTATACCTTTGTATATTTCATCACTGAAGCTTCCTTCAACCATGGAATGAGTCCTTATGTTTATGTTACGTATCGGCACGTCGTTGCCGGGGTTGTTATGTTCCCTTTTGCATACTTTCTAGAGAGAAAAGTAAGGCCAAAGCTGACATTTGCTCTTTTTATGGAAATTTTTGTGCTTTCAGTGTTGGGGATAACTTTGTCTCTCAATTTATACTTTGCAAGCTTAAAGTATACTTCTCCAACCTTTCTTGCTTCCATGTACAACACCGTATCATGCCTCACCTTCATTATTGCAGTGTTACTCAGGTTTGAGATTGTTGATATTAGAAATCCACGTGGCATAGCAAAAGTACTTGGGACAATAATCTCCTTAGCTGGTGTTATGACCATGACACTATACAAGGGACCTATGATGAGAAATTTGTGGCATCCTCTAATCCATATTCAACCAAAAAGTGCTTCTATCGGTGAGGGTGGATTAAGGGGTTCACTCCTTACCGTTTCAAGTTGTTTTACATTGTCTATGTGGTACATTATGCAGGCATCCACTTTGAAAAGATACCCTGCTCAATTATCACTCACTACATGGATGTGTTTTATTGGAGCAGCACAATCAGCTGTTTTCACAGTGATAATAGAACACAATAACCCTTCAGCATGGATTATAGGGATCAACATTGACTTGTGGTCCACAATATATGGGGGAATTGTTGTTGGTGGATTGTTGATGTACATTCAACTATGGTGCACTGAGAAAAAAGGGCCAGTTTTTGTCACAGTCTTTAACCCTCTTTGTACCATATTTGTGGCAATTCTTGCATACTTCGTCCTTGGTGAAAAGCTTTATTTGGGCAGCATCATAGGAGCATTTATTGTCATCATGGGTCTGTATTTGTTGCTGTGGGGTAAAGAAGGTGACAAAGAGGTTGATTTCAAGACCGAACAGTCCACTAGTGATGACCAAGAATGCAGAGTGTAG 999 0.4004 MILAQVGYTFVYFITEASFNHGMSPYVYVTYRHVVAGVVMFPFAYFLERKVRPKLTFALFMEIFVLSVLGITLSLNLYFASLKYTSPTFLASMYNTVSCLTFIIAVLLRFEIVDIRNPRGIAKVLGTIISLAGVMTMTLYKGPMMRNLWHPLIHIQPKSASIGEGGLRGSLLTVSSCFTLSMWYIMQASTLKRYPAQLSLTTWMCFIGAAQSAVFTVIIEHNNPSAWIIGINIDLWSTIYGGIVVGGLLMYIQLWCTEKKGPVFVTVFNPLCTIFVAILAYFVLGEKLYLGSIIGAFIVIMGLYLLLWGKEGDKEVDFKTEQSTSDDQECRV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03199 332 SUPERFAMILY Multidrug resistance efflux transporter EmrE 31 141 - -
Trre2g03199 332 SUPERFAMILY Multidrug resistance efflux transporter EmrE 203 310 - -
Trre2g03199 332 Pfam EamA-like transporter family 14 137 IPR000620 GO:0016020
Trre2g03199 332 Pfam EamA-like transporter family 168 307 IPR000620 GO:0016020
Trre2g03199 332 PANTHER WAT1-RELATED PROTEIN 1 320 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03199 Trre-Chr2 28426553 28428985 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03199 1 331 Nodulin-like Gene Family AT5G07050 41.499 3.30e-93 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03199 - - gmx:100527877 545.814