Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03198 ATGGAGCAAAAAATATTTTCTTTTCTGCTTGCATTCAAAGAGTTCAAGCCACACCTGCTCATGATCTTAGCCCAAGTGGGCTATACCTTTGTATATTTCATCACTGAAGCTTCCTTCAACCATGGAATGAGTCCTTATGTTTATGTTACGTATCGGCACGTCGTTGCCGGGGTTGTTATGTTCCCTTTTGCATACTTTCTAGAGAGAAAAGTAAGGCCAAAGCTGACATTTGCTCTTTTTATGGAAATTTTTGTGCTTTCAGTGTTGGGGATAACTTTGTCTCTCAATTTATACTTTGCAAGCTTAAAGTATACTTCTCCAACCTTTCTTGCTTCCATGTACAACACCGTATCATGCCTCACCTTCATTATTGCAGTGTTACTCAGGTTTGAGATTGTTGATATTAGAAATCCACGTGGCATAGCAAAAGTACTTGGGACAATAATCTCCTTAGCTGGTGTTATGACCATGACACTATACAAGGGACCTATGATGAGAAATTTGTGGCATCCTCTAATCCATATTCAACCAAAAAGTGCTTCTATCGGTGAGGGTGGATTAAGGGGTTCACTCCTTACCGTTTCAAGTTGTTTTACATTGTCTATGTGGTACATTATGCAGGCATCCACTTTGAAAAGATACCCTGCTCAATTATCACTCACTACATGGATGTGTTTTATTGGAGCAGCACAATCAGCTGTTTTCACAGTGATAATAGAACACAATAACCCTTCAGCATGGATTATAGGGATCAACATTGACTTGTGGTCCACAATATATGGGGGAATTGTTGTTGGTGGATTGTTGATGTACATTCAACTATGGTGCACTGAGAAAAAAGGGCCAGTTTTTGTCACAGTCTTTAACCCTCTTTGTACCATATTTGTGGCAATTCTTGCATACTTCGTCCTTGGTGAAAAGCTTTATTTGGGCAGCATCATAGGAGCATTTATTGTCATCATGGGTCTGTATTTGTTGCTGTGGGGTAAAGAAGGTGACAAAGAGGTTGATTTCAAGACCGAACAGTCCACTAGTGATGACCAAGAATGCAGAGTGTAG 1059 0.3994 MEQKIFSFLLAFKEFKPHLLMILAQVGYTFVYFITEASFNHGMSPYVYVTYRHVVAGVVMFPFAYFLERKVRPKLTFALFMEIFVLSVLGITLSLNLYFASLKYTSPTFLASMYNTVSCLTFIIAVLLRFEIVDIRNPRGIAKVLGTIISLAGVMTMTLYKGPMMRNLWHPLIHIQPKSASIGEGGLRGSLLTVSSCFTLSMWYIMQASTLKRYPAQLSLTTWMCFIGAAQSAVFTVIIEHNNPSAWIIGINIDLWSTIYGGIVVGGLLMYIQLWCTEKKGPVFVTVFNPLCTIFVAILAYFVLGEKLYLGSIIGAFIVIMGLYLLLWGKEGDKEVDFKTEQSTSDDQECRV 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03198 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Trre2g03198 352 SUPERFAMILY Multidrug resistance efflux transporter EmrE 223 330 - -
Trre2g03198 352 PANTHER WAT1-RELATED PROTEIN 17 340 IPR030184 GO:0016020|GO:0022857
Trre2g03198 352 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020
Trre2g03198 352 Pfam EamA-like transporter family 188 327 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03198 Trre-Chr2 28426493 28428985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03198 16 351 Nodulin-like Gene Family AT5G07050 41.477 5.94e-95 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03198 - - gmx:100527877 566.229