Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03107 ATGAGGCGCCAAAATTATAACTTATCGAAATTGTTGCACATTCATCTCACACCAAAGACAACTATTTCACGACAACAACATTCATCTTCTACACTGAAAATTCAAATTGTCACAAGGAACCAACAACCTCAAACTTTGATGCAAATGGTGTACCCATTCCTATACATATTAATCATACAAGTTCTCTTTGCGGTCATGAATGTCCTTATGAAGCTAGCAATAGACAACGACATAAGCAATTATGTTTTTGTTGTCTATCGCAATGGAATTGCATCGTTGGTCATTGCTCTAATTGCATTTTATTTCGATAGAGTTATGGGACTTGCTGATATTGATTCTCAAGAATTAGGAACAAACCCTCCAAATCCTGATATCATTGAGATTCAATCAAGCGATGATGAAAGAGATCCACCTCATCCATGTCAGGTTATCCCAACATATTTTTCAAAAAACAATCTCGATCACACTGATCAAATTATGTTAAAATACCCTAAAACAAGGTCTATTTATGTGTGCAACATTGAAACTTCAACCATTCCTAACAAAAATGGTTTCTACAAAAAAATGCTTACCGGCGGATGGTTCGATTTTGTGGCGGACGAAAAGCTCAAAGCTGGTGACAAATTGCAGTTTGAGTTCAAAACTTATCCTATTGAGCTCAAGGTCAGCATTCTTCGTCAAAGATCGACGAACTAA 696 0.3635 MRRQNYNLSKLLHIHLTPKTTISRQQHSSSTLKIQIVTRNQQPQTLMQMVYPFLYILIIQVLFAVMNVLMKLAIDNDISNYVFVVYRNGIASLVIALIAFYFDRVMGLADIDSQELGTNPPNPDIIEIQSSDDERDPPHPCQVIPTYFSKNNLDHTDQIMLKYPKTRSIYVCNIETSTIPNKNGFYKKMLTGGWFDFVADEKLKAGDKLQFEFKTYPIELKVSILRQRSTN 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03107 231 ProSiteProfiles B3 DNA-binding domain profile. 189 228 IPR003340 GO:0003677
Trre2g03107 231 Gene3D - 119 229 IPR015300 -
Trre2g03107 231 CDD B3_DNA 143 226 IPR003340 GO:0003677
Trre2g03107 231 SUPERFAMILY DNA-binding pseudobarrel domain 142 226 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03107 Trre-Chr2 27518833 27520417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03107 47 104 Nodulin-like Gene Family AT2G37460 43.103 2.93e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03107 - - tpra:123889652 63.929