Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03038 ATGTCAAGTACCACAAGAAATCTGAGGAACCTTGGCCTCTGCTTTTCAAATTCCATTCCTCAATCAAATTCTCCACCTACAAGTCCCACTGTTACCACTACTAGTACAGCTTCCTCACATCAACATCATCATCAAATTCATGACAAACCTTCTTCATCTACATCTTCCACATCAATTATGATCAAGAACTTCAACTCTCTCTATGACCCTTCCTTAACCTCTTCTAACCACACTTTATGCTCTTCTTCACTCTCTACCACTTTCACTACATCCACTTCTTTTGAAACCGAACCCGAACCTGAGCCAGTGGATTTCGCGGCAGCCTTTGCATCTCAACGCTTCTTCTTCTCCTCCCCCGGAAGCTCCAACTCACTAATCGAATACACAAACACAAATATCATCCAACATTCTTCGGTACCATTGACAGATAAGTCCAATAGTGTTAAGCGTGAGAAGAAAGAGAAGGTAGAAAAAGATGAGGTTTTGTTCAATGGAAGTGTGGCGGTACCAACCTACTCTCCCGACCCTTATACCGATTTCAGAAGGTCGATGCAAGAGATGGTGGAAGCGCGGCCAGAGTTGATGGATGTGAGATCAAATTGGAACATCTTGCATGAGTTGCTACTATGTTACCTTGCTCTCAACCCAAAGAACACTCACAAGTACATTCTAAGTGCTTTTGCGGATCTCCTCGTTACGCTCATGTCATTCTAG 714 0.4328 MSSTTRNLRNLGLCFSNSIPQSNSPPTSPTVTTTSTASSHQHHHQIHDKPSSSTSSTSIMIKNFNSLYDPSLTSSNHTLCSSSLSTTFTTSTSFETEPEPEPVDFAAAFASQRFFFSSPGSSNSLIEYTNTNIIQHSSVPLTDKSNSVKREKKEKVEKDEVLFNGSVAVPTYSPDPYTDFRRSMQEMVEARPELMDVRSNWNILHELLLCYLALNPKNTHKYILSAFADLLVTLMSF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03038 237 Pfam Transcriptional repressor, ovate 173 234 IPR006458 -
Trre2g03038 237 ProSiteProfiles OVATE domain profile. 169 233 IPR006458 -
Trre2g03038 237 NCBIfam uncharacterized plant-specific domain TIGR01568 167 235 IPR006458 -
Trre2g03038 237 MobiDBLite consensus disorder prediction 14 40 - -
Trre2g03038 237 MobiDBLite consensus disorder prediction 14 56 - -
Trre2g03038 237 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 43 234 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03038 Trre-Chr2 26866451 26867164 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre2g03038 Ovate 1.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03038 - - aprc:113871147 228.024