Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g03011 ATGGGTAACGTAGACTATGATTACACTTGTTCGGGAATGAACAACGTTGATGAGAATCATGTACAACGTGTGGAAATTCCACCTCCTCAACCATTTTTGAAGTCTTTGAAATATTCAATGAAAGAGACTTTTTTTCCAGATGATCCTTTGAGGAGGTTTAAGAATCAACCAGCTTCCAAAAAGTTTGTGCTTGGTGTTCAATATTTCTTCCCTATATTTGAATGGGCACCAAGATACACTTTTCAGTTCTTGAAATCTGATCTCATAGCTGGCATCACTATTGCTAGTTTGGCTATTCCTCAAGGCATTAGCTATGCCAAACTTGCCAACCTCCCCCCAATTCTTGGACTATATTCGAGCTTTATTCCACCATTGATTTATGCAATGATGGGTAGTTCAAGAGATTTGGCAGTTGGAACAGTGGCAGTTGGATCTCTTTTGATGGGTTCCATGTTAGGCAATGAAGTTAATCCCAATCAAAACCCAAAGCTTTTTCTCCACCTTGCTTTCACAGCTACATTCTTTGCCGGGGTTTTGCAAGCATCATTGGGTTTCTTTAGGTTAGGGTTTATCGTGGATTTCCTATCACATGCAGCAATAGTAGGATTCATGGGAGGAGCAGCGACTGTGGTGTGTCTGCAGCAGCTGAAATCAATTCTAGGACTTGAACATTTCACCCATGCTGCTGATCTTGTATCAGTCTTGCGCTCTGTTTTTACCCAAACTCATCAGTGGAGGTGGGAAAGCGCAGTGTTGGGATTTTGCTTCATTTTCTTTCTCCTTGTCACAAGATACTTCAGCAAAAAACAACCAAAATTCTTTTGGGTTTCAGCAATGACACCGTTGGCGTCGGTTATACTCGGAAGTGTGCTAGTTTATTTCACTCACGCAGAGAACCATGGCGTTCAAGTGATAGGAGAATTGAAAAAAGGACTTAATCCACCATCACTCACAGAATTGGTATTTGTGTCACCATATATGACCACAGCTATCAAAACTGGCCTTATTGTTGGCATTATTGCTCTTGCAGAAGGAATAGCTGTAGGAAGAAGCTTTGCAATGTATAAAAATTACAATATTGATGGAAACAAAGAGATGATTGCTATTGGAACCATGAACATAGTTGGTTCATTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGTTCGGCTGTAAACTACAATGCTGGATGCAAGACTGCAGTATCCAACATAGTGATGTCAATTGCAGTGATGCTGACACTGTTGTTTTTGACACCTTTGTTCTATTACACTCCTCTGGTGGTACTATCAGCCATAATTGTATCTGCAATGCTTGGACTTATAGATTATGAAGCAGCCATCCATCTGTGGAAGATTGATAAATTCGATTTTGTCGTCTGCATTAGCGCATATATCGGTGTTGTTTTTGGAAGTGTTGAAACTGGCTTAGTCATAGCAGTTGCGATATCGGTACTTCGGTTACTTCTATTTGTTGCTAGACCAAGGACATTTGTTTTGGGAAATATTCCAAACTCTATAATTTACAGAAACATTGAGCATTATCCGAATGCAAATCGTGTTTCTGGAATCCTAATTCTAAAGATTGATGCACCAATTTACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCTCTAGGTGGATTGATGAAGAGGAAGACAGGATTAAATCTACGGAGGAAACAAGTTTGAAGTATATTATAATGGATATGAGTGCTGTTGGGAATATTGATACAAGTGGAATAAGCATGCTTGAAGAGATTAAGAAGATTGCTGAAAGAAGAGAGCAACAACTTGTTTTGGTCAATCCTGGAAGTGAGGTGATGAAGAAACTAAACAAATCCAACTTCCAAAAGGACACAGGTGGAAATTGGATTTATCTGACAGTTGAAGAGGCTGTTAGAGCATGTAACTTTGTGCTTCATTCAAGCAAAACAAATCCCAAAAGAGATGAATCAGAGGGTTGGAACAATGTTTGA 1983 0.3964 MGNVDYDYTCSGMNNVDENHVQRVEIPPPQPFLKSLKYSMKETFFPDDPLRRFKNQPASKKFVLGVQYFFPIFEWAPRYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLGNEVNPNQNPKLFLHLAFTATFFAGVLQASLGFFRLGFIVDFLSHAAIVGFMGGAATVVCLQQLKSILGLEHFTHAADLVSVLRSVFTQTHQWRWESAVLGFCFIFFLLVTRYFSKKQPKFFWVSAMTPLASVILGSVLVYFTHAENHGVQVIGELKKGLNPPSLTELVFVSPYMTTAIKTGLIVGIIALAEGIAVGRSFAMYKNYNIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAVSNIVMSIAVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFVVCISAYIGVVFGSVETGLVIAVAISVLRLLLFVARPRTFVLGNIPNSIIYRNIEHYPNANRVSGILILKIDAPIYFANASYLRERISRWIDEEEDRIKSTEETSLKYIIMDMSAVGNIDTSGISMLEEIKKIAERREQQLVLVNPGSEVMKKLNKSNFQKDTGGNWIYLTVEEAVRACNFVLHSSKTNPKRDESEGWNNV 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g03011 660 NCBIfam sulfate permease 71 634 IPR001902 GO:0016020|GO:0055085
Trre2g03011 660 ProSiteProfiles STAS domain profile. 515 638 IPR002645 -
Trre2g03011 660 PANTHER SULFATE TRANSPORTER 34 641 IPR001902 GO:0016020|GO:0055085
Trre2g03011 660 SUPERFAMILY SpoIIaa-like 518 638 IPR036513 -
Trre2g03011 660 Gene3D STAS domain 495 640 IPR036513 -
Trre2g03011 660 Pfam Sulfate permease family 84 464 IPR011547 GO:0016020
Trre2g03011 660 Pfam STAS domain 516 634 IPR002645 -
Trre2g03011 660 CDD STAS_SulP_like_sulfate_transporter 516 631 - -
Trre2g03011 660 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Trre2g03011 660 FunFam Sulfate transporter 31 495 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g03011 Trre-Chr2 26619713 26628479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g03011 13 660 Inorganic Solute Cotransporters AT4G02700 69.029 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g03011 K17471 - gmx:100810196 1129.78