Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02985 ATGTCGAGAACGGAAAGTATAGACATTGTAACTGATCAGAACCTTGAAAAACATATTCACAAACACATGGGGTGCATGGCTGGTTTCTTTCAAATCTTCGACCGCAACCACATTCTCTCCACCAAACGTATCTACTCCACCACCAAAAGACTCCCTCCGCCATCACCGGAAACACCGCAGAAAGATGGTGGCTCACCGGTGTTATCAGCACCGTCACCTGTTAAAGAGATCCAACAATGTGAAGCAAAACCGATCCTTCCTGTTTTGGAACTCAAAGAAGGTACGAGGTCTTCATGGAAATTCTCAAGAGAAGCTCCTAGACTGTCTCTTGATAGCAGAGCAGTTGTTGATGCGAAAGGAGCACTTCATCCAAGAGAGATCCGAACAAACACAACGGTAAATATCGATAACGGTGGCGAGAAACAGCGTCGTTCCACCAGTAGTGTTATTGTTAGGCTAATGGGTCTTGACTCATTACCAACGGATTCCGCTGCGAAGCTTCAAAGATCCGCATCGGAGTCCAGAGTCTCCAGAGATCGGTTCTCTGAGTCGAAGATTAAGTCCAACAATTACACTCAACGTAGCAATGTGGGCTCGAGCCAGATGAATAATCATAATCATAATCACAATCATACTAATTCTAATGTTGTTAATGTTAATGCTAATAATGTTAATTATGTTAATTCTTATGGTACCAATGATAATCGATTGTGGAATGGTAGAGGTTCAGAGGGAGGTAAAGGTTCACTTCCTCAGAAGCAGAGTAAGGGAACAATAATGGTACAAAAGAAGAGTTTCTATGATTCTACTGATTTCTTCCCTGAACCAAAGCAAAATGTTTCGATCTATGGAGAGATTGAAAAAAGGTTGAAGATGCGTGGGATTAATCAACCTTCTCAAGATCTTGACACACTCAAGCATATCTTAGAGGCTCTCCAGCTTAAAGGCCTTCTTCATTCCCAAAGACCAAACCAATCTCCCATTGTTCTAATGAAACCTCTTAGATCTTCTTCACGGTTCGACCAGTTCAATGGTCGAACCGGATACGATTCTCCTCCTCCGCATTCTTCCGTTCGGTCCAGCCCTCGTGCTCGCCGGAACTTAAGTCCTAGACTTTCCGGTGAGAATGATCGGGCTCAAGTTAATTCAAGAAACTCGAGCCCGAACAGGAGGAATGTCCCGAACGTTGAGACACGGAGGAGAATTAGTAACGAGGGCGTTGATTCGAGAAGAGTGTCTCCAGTGAATTCTCCTAAGATAAGTTCAAGAAGAAATGCAATGGCTCCGACAATGACAGGTGGATCTCCTAGAATGAGAAAAGTGATTGATCCTAAGGTGAAAATGTTGAGTGTAGCAGAAGATGAATGGTCCACAGTTTCAGACAATAGCTTCACCACCTCAAATTCACATACAGACACAGAGAGGTATAAATTGGATGAGTACAAGGAAGGGAGGAATCTGCTAGATAGATGTGATAAATTGCTGAACAGTATAGCGGAGATAACAGCAGCGAACGAGTTACAACAACCGAGTCCAGTATCCGTTCTTGACTCGTCCTTTTACAAAGACGAGTGGTGTTCACCTTCACCAATTACAAAACGATGCATTGATTACAATTTCAAAGATCAAGCGGCGGAATCAGAAGATGAAATGTGGAGTGCAGGCGAAGGAAAATCCGACGAAGCAGAGGATTGTGATTTCGTTTACGTATCGGAGATTCTTCGTGCTTCTAGTTACTTTCCTGATGATTGTGACATTTTCAGTTTACTTGAGAAGCAACAATTTCTGAAGGGGAAAGATACATCAAAGGCTTCAACGTTACAGAGGCGGTTAATTTTCGACACATTGCAGGAAATTGTTAACCGGAACAATCGGTTACCACCGTGGAAGGCGGTAGTTCAGGGAGATGAGACGCCGAAGATCTGGTCGGAGTTTCGAAGGATACGAGAGAGGGAAGAATCAGAATCGGAGTCGTCGGAGGATTTGTTTGGAGTGATATGCGGTGTGCTGAAGAAGGATATGGCGGAGGAGATGAGTGGTTGGGGTGAATGGACGGTGGAGATCGGAGATGTTGTTTTGGATATCGAACGGCTGGTATTCAAGGATTTAATTGGTGAAACTATACAACATCTTGCTTCATTTTTACCTCAATGTAACAAACTAGAAGTGCTTCGTAGAAAACTTGTATTTTAA 2193 0.4332 MSRTESIDIVTDQNLEKHIHKHMGCMAGFFQIFDRNHILSTKRIYSTTKRLPPPSPETPQKDGGSPVLSAPSPVKEIQQCEAKPILPVLELKEGTRSSWKFSREAPRLSLDSRAVVDAKGALHPREIRTNTTVNIDNGGEKQRRSTSSVIVRLMGLDSLPTDSAAKLQRSASESRVSRDRFSESKIKSNNYTQRSNVGSSQMNNHNHNHNHTNSNVVNVNANNVNYVNSYGTNDNRLWNGRGSEGGKGSLPQKQSKGTIMVQKKSFYDSTDFFPEPKQNVSIYGEIEKRLKMRGINQPSQDLDTLKHILEALQLKGLLHSQRPNQSPIVLMKPLRSSSRFDQFNGRTGYDSPPPHSSVRSSPRARRNLSPRLSGENDRAQVNSRNSSPNRRNVPNVETRRRISNEGVDSRRVSPVNSPKISSRRNAMAPTMTGGSPRMRKVIDPKVKMLSVAEDEWSTVSDNSFTTSNSHTDTERYKLDEYKEGRNLLDRCDKLLNSIAEITAANELQQPSPVSVLDSSFYKDEWCSPSPITKRCIDYNFKDQAAESEDEMWSAGEGKSDEAEDCDFVYVSEILRASSYFPDDCDIFSLLEKQQFLKGKDTSKASTLQRRLIFDTLQEIVNRNNRLPPWKAVVQGDETPKIWSEFRRIREREESESESSEDLFGVICGVLKKDMAEEMSGWGEWTVEIGDVVLDIERLVFKDLIGETIQHLASFLPQCNKLEVLRRKLVF 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02985 730 MobiDBLite consensus disorder prediction 186 211 - -
Trre2g02985 730 MobiDBLite consensus disorder prediction 339 438 - -
Trre2g02985 730 PANTHER LONGIFOLIA PROTEIN 13 60 IPR033334 GO:0051513
Trre2g02985 730 Pfam Domain of unknown function (DUF4378) 566 706 IPR025486 -
Trre2g02985 730 MobiDBLite consensus disorder prediction 46 74 - -
Trre2g02985 730 MobiDBLite consensus disorder prediction 409 429 - -
Trre2g02985 730 MobiDBLite consensus disorder prediction 339 393 - -
Trre2g02985 730 MobiDBLite consensus disorder prediction 163 211 - -
Trre2g02985 730 MobiDBLite consensus disorder prediction 237 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02985 Trre-Chr2 26297084 26299832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02985 99 730 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 37.165 1.62e-101 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02985 - - psat:127095672 1080.09