Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre2g02947 | ATGGAAGAGGTTGAACAAGCTAACAAAACAGCTGTTGAAAGCTGTCATAGAGTTCTGAGTATGTTGTGTCAACCAAGGGATCAAGTTCATCATATGAATTTAATGGTGGAAACTGGTGAAGCTGTGAATAGGTTCAAGAAAGTTGTGTCTTTGCTTCATAATGGTTTGGGTCATGCAAGAGTTAGGAAGAGTAAAAATCATCAACAAGACCCTTTTCCTCAAAATGTTTTCTTAGACAACCCAATTTGCAAAAAAACCATTAACCATCAAACTAAAAATCTCCACTTTACTCAAACTAGCCAACCTGAAAATTCAGTTCAGGAACTTGGTTTAACCTTAAGAAATCCACTTTCTCTTGGAAACCCTTCTTTGGAATTGAGCTCGAACGGTAAAAGTCCTCTTCACCTTATTCAACCGTTTGGATCATCTCACTATAACTTCATTCAGCAGCAACAACAGCAGCAGCAGCAGCAACAAAGGTTGTTGCTGCATCAGCAGCAACAGCAGCAGCAGCAGCAACAAATGAAGCATCAAGCTGAAATGATGTTCCGAAGGAACACTAGCGGCATAAATCTTAATTTTGACAACACCACTAGCGGCACACCAACAATGTCGTCTAATAGGTCTTTCATTTCGTCGTTGAGCATAGACGGAAGTGTAGCTAACATGGACGGAAGTTCATTCCATTTGATAGGAGCTCCAATCTCTTCGGATCAGAATTCACAGCAGCACAAGAGAAAATGTTCTGCTAGAGGCGATGAGGGAAGTCTGAAATGTGGTAGCAGTTCTAAATGCCATTGCTCAAAGAAAAGGAAGCATAGAGTGAAGAGATCGATTAAGGTGCCTGCAATCAGCAACAAGCTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGGCAGAAGCCGATCAAGGGCTCTCCTCACCCTAGGGGATATTACAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTCGAGAGGTGCTTGGAAGAGCCTACTATGCTAATCGTTACCTATGAAGGTGATCATAACCACCCCAAGGTACCGACACAATCTGCAAATGCATGA | 1083 | 0.4266 | MEEVEQANKTAVESCHRVLSMLCQPRDQVHHMNLMVETGEAVNRFKKVVSLLHNGLGHARVRKSKNHQQDPFPQNVFLDNPICKKTINHQTKNLHFTQTSQPENSVQELGLTLRNPLSLGNPSLELSSNGKSPLHLIQPFGSSHYNFIQQQQQQQQQQQRLLLHQQQQQQQQQQMKHQAEMMFRRNTSGINLNFDNTTSGTPTMSSNRSFISSLSIDGSVANMDGSSFHLIGAPISSDQNSQQHKRKCSARGDEGSLKCGSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGDHNHPKVPTQSANA | 360 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre2g02947 | 360 | MobiDBLite | consensus disorder prediction | 234 | 255 | - | - | |
Trre2g02947 | 360 | Pfam | Plant zinc cluster domain | 245 | 290 | IPR018872 | - | |
Trre2g02947 | 360 | FunFam | WRKY transcription factor 65 | 276 | 353 | - | - | |
Trre2g02947 | 360 | SUPERFAMILY | WRKY DNA-binding domain | 290 | 352 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Trre2g02947 | 360 | Coils | Coil | 148 | 168 | - | - | |
Trre2g02947 | 360 | Gene3D | WRKY domain | 279 | 354 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Trre2g02947 | 360 | SMART | WRKY_cls | 292 | 352 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre2g02947 | 360 | Pfam | WRKY DNA -binding domain | 294 | 351 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre2g02947 | 360 | ProSiteProfiles | WRKY domain profile. | 287 | 353 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Trre2g02947 | 360 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 2 | 357 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre2g02947 | Trre-Chr2 | 25990715 | 25992524 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre2g02947 | 1 | 357 | WRKY Transcription Factor Family | AT2G30590 | 55.584 | 2.53e-120 | 351 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Trre2g02947 | WRKY | 1.1e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre2g02947 | - | - | tpra:123924038 | 602.438 |