Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02947 ATGGAAGAGGTTGAACAAGCTAACAAAACAGCTGTTGAAAGCTGTCATAGAGTTCTGAGTATGTTGTGTCAACCAAGGGATCAAGTTCATCATATGAATTTAATGGTGGAAACTGGTGAAGCTGTGAATAGGTTCAAGAAAGTTGTGTCTTTGCTTCATAATGGTTTGGGTCATGCAAGAGTTAGGAAGAGTAAAAATCATCAACAAGACCCTTTTCCTCAAAATGTTTTCTTAGACAACCCAATTTGCAAAAAAACCATTAACCATCAAACTAAAAATCTCCACTTTACTCAAACTAGCCAACCTGAAAATTCAGTTCAGGAACTTGGTTTAACCTTAAGAAATCCACTTTCTCTTGGAAACCCTTCTTTGGAATTGAGCTCGAACGGTAAAAGTCCTCTTCACCTTATTCAACCGTTTGGATCATCTCACTATAACTTCATTCAGCAGCAACAACAGCAGCAGCAGCAGCAACAAAGGTTGTTGCTGCATCAGCAGCAACAGCAGCAGCAGCAGCAACAAATGAAGCATCAAGCTGAAATGATGTTCCGAAGGAACACTAGCGGCATAAATCTTAATTTTGACAACACCACTAGCGGCACACCAACAATGTCGTCTAATAGGTCTTTCATTTCGTCGTTGAGCATAGACGGAAGTGTAGCTAACATGGACGGAAGTTCATTCCATTTGATAGGAGCTCCAATCTCTTCGGATCAGAATTCACAGCAGCACAAGAGAAAATGTTCTGCTAGAGGCGATGAGGGAAGTCTGAAATGTGGTAGCAGTTCTAAATGCCATTGCTCAAAGAAAAGGAAGCATAGAGTGAAGAGATCGATTAAGGTGCCTGCAATCAGCAACAAGCTTGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGGCAGAAGCCGATCAAGGGCTCTCCTCACCCTAGGGGATATTACAAGTGCAGCAGCATGAGAGGCTGCCCTGCTAGGAAGCATGTCGAGAGGTGCTTGGAAGAGCCTACTATGCTAATCGTTACCTATGAAGGTGATCATAACCACCCCAAGGTACCGACACAATCTGCAAATGCATGA 1083 0.4266 MEEVEQANKTAVESCHRVLSMLCQPRDQVHHMNLMVETGEAVNRFKKVVSLLHNGLGHARVRKSKNHQQDPFPQNVFLDNPICKKTINHQTKNLHFTQTSQPENSVQELGLTLRNPLSLGNPSLELSSNGKSPLHLIQPFGSSHYNFIQQQQQQQQQQQRLLLHQQQQQQQQQQMKHQAEMMFRRNTSGINLNFDNTTSGTPTMSSNRSFISSLSIDGSVANMDGSSFHLIGAPISSDQNSQQHKRKCSARGDEGSLKCGSSSKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPTMLIVTYEGDHNHPKVPTQSANA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02947 360 MobiDBLite consensus disorder prediction 234 255 - -
Trre2g02947 360 Pfam Plant zinc cluster domain 245 290 IPR018872 -
Trre2g02947 360 FunFam WRKY transcription factor 65 276 353 - -
Trre2g02947 360 SUPERFAMILY WRKY DNA-binding domain 290 352 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre2g02947 360 Coils Coil 148 168 - -
Trre2g02947 360 Gene3D WRKY domain 279 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre2g02947 360 SMART WRKY_cls 292 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre2g02947 360 Pfam WRKY DNA -binding domain 294 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre2g02947 360 ProSiteProfiles WRKY domain profile. 287 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre2g02947 360 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 357 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02947 Trre-Chr2 25990715 25992524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02947 1 357 WRKY Transcription Factor Family AT2G30590 55.584 2.53e-120 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre2g02947 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02947 - - tpra:123924038 602.438