Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02944 ATGCGGTATGAAATTGAAACGACGTATCGTTTGATGCATCATAAGACTTACACTGGGAATATATTACTCGATGTGAACCCTTTCATAAGGCTTCCTCATTTATATGATAGCCATATGATGGCACAATATAAAGGAGCAGGCTTTGGTGAGCTAAGTCCACATTCTTTTGCTATTGCTGATGCAGCATATAGTTTGTGGAGATTCAATTTGACCAGAAGGGAAGAATTTATGGAGCTGCTATCAGAACATACCTGCTGGAAAGATCACGTGTTTGCCAGTTGTCGGATCCAGAGAGGAATTATCACTGTTTCTATTTGCTTTGTGCTGCACCTCAAAAGGTTGTTCAGAAGTACAAATTTAGAAACCCGAGAACCTTTCATTATCTAA 387 0.3928 MRYEIETTYRLMHHKTYTGNILLDVNPFIRLPHLYDSHMMAQYKGAGFGELSPHSFAIADAAYSLWRFNLTRREEFMELLSEHTCWKDHVFASCRIQRGIITVSICFVLHLKRLFRSTNLETREPFII 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02944 128 Gene3D Kinesin motor domain 1 83 IPR036961 -
Trre2g02944 128 ProSiteProfiles Myosin motor domain profile. 1 128 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre2g02944 128 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 66 IPR027417 -
Trre2g02944 128 Pfam Myosin head (motor domain) 5 64 IPR001609 GO:0003774|GO:0005524|GO:0016459
Trre2g02944 128 PANTHER MYOSIN 8 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02944 Trre-Chr2 25972152 25976429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02944 1 63 Myosins gene family AT5G20490 71.429 2.19e-25 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02944 K10357 - gmx:100786893 100.908