LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre2g02942	ATGGCTGCAAGAGAAACTGGAGCTCTCCAAGCTGCCAAAAATAAGCTGGTTAAGCAAGTTGAAGATCTTACATTGAGGTTGCAGCTGGAAAAGCGCATGAGGGCTGACATGGAAGAAGCAAAACAACAAGAAAATGAAAAATTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTCAAAGAAACTAAGTCATTGCTTCAAAAGGAGCGTGAGGCTGCAAAAAGAGAAGCAGAGAGAGTGCCTGTCGTACAGGAGGTTGAAGCAAGCTTTGGAGAAGCTACCCATGTATATGAGAAGTTAGAAAATGGTCACCATGTGGTAGAAGATCAGAAAGCTACTGAAACACAGACGGTCACGCCTGTGAAAAAGTTCGGTACAGAGTCTGATAGCAAATTAAGGAGATCATACATTGAACGTCGACATGAAAATGTTGATTCCCTTATCAATTGTGTTATGAAAAATACTGGATTCCATCATGGAAAGCCTATTGCTGCATTCACCATTTACAAATGTCTTCTCCACTGGAAATCATTTGAAGCTGAAAGTACAAGTGTATTTGATCGCCTTATCCATATGATTGGCTCTGCAATTGAGAATCAAGACGACAATGATCTTATGGCTTACTGGCTGTCAAATACATCTGCACTATTGTTTCTGGTCCAACAAAGATCCGGTGGTTCAAATGATGCAGCCCCAGTTAGAAAACCACCAAATCCAACATCCCTCTTTGGCAGAATGACTATGGCACCAAGAACATCAAAGGGAGTCTTAAGATCTGGCCGATCTTTTAGTAAAGATTCTCCCATGGGTCATTGGTAG	819	0.4139	MAARETGALQAAKNKLVKQVEDLTLRLQLEKRMRADMEEAKQQENEKLQSALQEMQLQFKETKSLLQKEREAAKREAERVPVVQEVEASFGEATHVYEKLENGHHVVEDQKATETQTVTPVKKFGTESDSKLRRSYIERRHENVDSLINCVMKNTGFHHGKPIAAFTIYKCLLHWKSFEAESTSVFDRLIHMIGSAIENQDDNDLMAYWLSNTSALLFLVQQRSGGSNDAAPVRKPPNPTSLFGRMTMAPRTSKGVLRSGRSFSKDSPMGHW	272

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre2g02942	272	PANTHER	DILUTE DOMAIN-CONTAINING PROTEIN YPR089W	38	232	-	-
	Trre2g02942	272	MobiDBLite	consensus disorder prediction	226	245	-	-
	Trre2g02942	272	Coils	Coil	20	72	-	-
	Trre2g02942	272	MobiDBLite	consensus disorder prediction	253	272	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre2g02942	Trre-Chr2	25966642	25969421	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre2g02942	1	253	Myosins gene family	AT5G43900	40.462	4.44e-64	215

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre2g02942	K10357		-	gmx:100786893	287.345