Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02939 ATGGCTAATTTCAATACAATCACTGATCTTGCTCTCAATCTTTTGAGAGGTCATATGAATCCAAATCCAATTACTGCTCGAGATAAGTTGATAGCTGAGCTGCAAATTAGATATCACACTTTTTATGTTGAATTTGATATAAACGGAGGTGCAGTAAGGCTACCGAAGATGTTTTCTCAAGATTTTGGGCATGATGTTAGGCGTTTTGCTAGATTGACAGATCCATTAGGGAATCAGTTCGAAGTTTTAATGGAAAAAATTAATGGTAATATTTATCTAACGTGGGGATGGAAAGCCCTAAAAGATTTCTACAACATTTGTCTTGGGGCGTGGATAATTTTGCGGTACACCGGAATGGGATAA 363 0.3691 MANFNTITDLALNLLRGHMNPNPITARDKLIAELQIRYHTFYVEFDINGGAVRLPKMFSQDFGHDVRRFARLTDPLGNQFEVLMEKINGNIYLTWGWKALKDFYNICLGAWIILRYTGMG 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02939 120 Gene3D - 33 120 IPR015300 -
Trre2g02939 120 SUPERFAMILY DNA-binding pseudobarrel domain 39 118 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02939 Trre-Chr2 25944458 25945011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02939 38 118 B3 DNA Binding Superfamily AT3G18990 28.395 2.97e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02939 - K03699 tpra:123923880 127.872