Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02930 ATGAGAGACATATATGAAAAACAATCATCATCACCTGCAGTTTCAAATTATGCATCAAGTAGTGGCTTATCTGGAGATGATAAAGAGATTGGTTATAGAGCTACAACATCAAATCATCCATATGTTTTGGCTAAAATGTCTTCTCTTCACAACTTACCTAACAAAATTGACCTCAATTTTGCTCGCATGGTAATGGCAGAGGTGGTGGGTACTTATATATTGATGTTTTGTGTATGTGGAATCATTGCAAGCACACATCAAAATGATGCAGTAGGACTTCTGGAGTATGCAGCAACAGCAGGATTAACAGTTGTTGTGATAATTTTCTCTATAGGTCCAATTTCTTGTGCACATGTTAACCCAGCTGTTACAATAGCCTTTGCAACGATTGGTCAAATTTCCATGGTTCAAGGTACCAATTTACATAATAGCACAAACAATTGGTTCTTTGATGGCAACATATATTGGTAG 471 0.3652 MRDIYEKQSSSPAVSNYASSSGLSGDDKEIGYRATTSNHPYVLAKMSSLHNLPNKIDLNFARMVMAEVVGTYILMFCVCGIIASTHQNDAVGLLEYAATAGLTVVVIIFSIGPISCAHVNPAVTIAFATIGQISMVQGTNLHNSTNNWFFDGNIYW 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02930 156 Pfam Major intrinsic protein 59 138 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g02930 156 PANTHER AQUAPORIN NIP2-1 47 137 IPR034294 -
Trre2g02930 156 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Trre2g02930 156 Gene3D Glycerol uptake facilitator protein. 26 140 IPR023271 -
Trre2g02930 156 SUPERFAMILY Aquaporin-like 58 137 IPR023271 -
Trre2g02930 156 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g02930 156 PRINTS Major intrinsic protein family signature 62 81 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trre2g02930 156 MobiDBLite consensus disorder prediction 1 24 - -
Trre2g02930 156 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02930 Trre-Chr2 25862060 25864070 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02930 43 150 Major Intrinsic Protein MIP AT4G18910 42.857 7.61e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02930 K09874 - zju:107423284 134.42