Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02922 ATGGATCTAGAATCATTGGTTTTGGTTTCTCTGTTACTTTTCTCTTCAACTCTCTTTTGGTTCTTATTCTTATCCAAATTTTCAAAATCCCCAAAAACACACTCTTCAACCACCGCCATTCCCAAATCCTACCCCATTTTCGGTTCCTCTTTTTCTATCGCAGCCAATTTCCACCGCCGTCTACAATGGACCTCCGACATTCTCCAAACCATCCCTTCCTCAACCTTCGTTCTCCATCGCGCCTTCGGTTCCCGCCAAGTTTACACGGCCAACCCCGCCGTGGTCCAACACATTCTCAAAACTAACTTCCATTGCTACAACAAAGGTCCTGCATTTCACCAATCACTCGTTGAATTTCTCGGCGACGGAATCTTCAACACCGACGGTGAAACATGGAAGTTTCAACGACAAATCTCCAGCCATGAATTCAACACTAAATCTCTTCGGAAGTTCGTCGAAACTGTCGTCGACGTTGAACTCTCTGATCGACTGCTTCCTATTCTCTCTGAAGCTTCAAAAAATCAAACGATTATCCCTAATTTTCAAGACATTCTCCAACGTTTCACGTTCGATAATATCTGCATAATCGCGTTTGGATTCGATCCAGAGTATCTTCTTCCTTCTCTTCCCGAAACCGCGTTTGCGAAAGCCTTCGATGATAGTTCAGTAATCAGCGGTGAGAGGTTTAATGCTGCGACTCCATTGATATGGAAATTGAAGAAAATGCTAAACATTGGAACAGAGCGACGGTTGAAAGAAGCAGTTGCAGAAGTAAGAGGACTTGCAACAAGAATCGTTAGGGAAAAGAAAAAAGAGCTTATAGAAAAATCAGAGTTGGAATCATTGGATATTTTATCGCGGTTTTTAAATTCTGGTCATTCAGATGAAGCTTTTGTTGTTGATATTGTAATAAGCTTTATTCTTGCTGGAAGAGATACAACTTCAGCTGCACTCACTTGGTTCTTTTGGTTACTCTCTAAGCATAATCACGTCGAGAATGAGATTATCAAAGAGATTACGGGGAAATCGGAAACGGTTAGTTATGATGAGGTGAAGGGTATGGTTTACACTCACGCGGCATTATGTGAGAGTATGAGATTGTATCCTCCGGTTCCGTTGGATAGTAAGGAAGTAGGGCACGACGATGTTTTGCCGGATGGGACTTTAGTGGAGAAAGGGTGGAGAGTGACTTATCATGTATATGCTATGGGAAGGTCTGAGAAGATATGGGGACCTGATTGGGCTGAGTTTCGACCGGAGAGGTGGTTGCGTCAGGTTGAGGATGGAAAATGGAGCTTTGTTGGAATGGATCCTTATAGTTATCCGGTTTTTCAGGCTGGGCCTAGGGTGTGTTTAGGGAGGGAAATGGCGTTCTTGCAAATGAAGAGGTTGGTTGCTGGGATTATGAGGGAGTTTAGGGTTGTTCCTGCAATGGATGAAGGGATTGAGCCGGAGTTCGATTCATACCTTACTTCAATCATGAAAGGCGGCTTTCCGGTAAAGATCGAGAAGCAAAAGTACGACGCAGATGAATAA 1536 0.4349 MDLESLVLVSLLLFSSTLFWFLFLSKFSKSPKTHSSTTAIPKSYPIFGSSFSIAANFHRRLQWTSDILQTIPSSTFVLHRAFGSRQVYTANPAVVQHILKTNFHCYNKGPAFHQSLVEFLGDGIFNTDGETWKFQRQISSHEFNTKSLRKFVETVVDVELSDRLLPILSEASKNQTIIPNFQDILQRFTFDNICIIAFGFDPEYLLPSLPETAFAKAFDDSSVISGERFNAATPLIWKLKKMLNIGTERRLKEAVAEVRGLATRIVREKKKELIEKSELESLDILSRFLNSGHSDEAFVVDIVISFILAGRDTTSAALTWFFWLLSKHNHVENEIIKEITGKSETVSYDEVKGMVYTHAALCESMRLYPPVPLDSKEVGHDDVLPDGTLVEKGWRVTYHVYAMGRSEKIWGPDWAEFRPERWLRQVEDGKWSFVGMDPYSYPVFQAGPRVCLGREMAFLQMKRLVAGIMREFRVVPAMDEGIEPEFDSYLTSIMKGGFPVKIEKQKYDADE 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02922 511 CDD CYP86A 75 498 - -
Trre2g02922 511 PANTHER CYTOCHROME P450 28 500 - -
Trre2g02922 511 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 Gene3D Cytochrome P450 25 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 SUPERFAMILY Cytochrome P450 41 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02922 511 Pfam Cytochrome P450 41 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02922 Trre-Chr2 25794595 25796130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02922 3 506 Cytochrome P450 AT5G63450 44.685 5.81e-146 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02922 K20769 K20768 ag:AAG33645 776.933