Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02916 ATGGAAAGTGAAGAAATTCTAAACATTGGAACGGAGCGACGGCTGAAAGAAGCCGTCGCTGAAGTAAGAGGACTCGCGACAAGAATTGTTAGAGAAAAGAAAAAAGAGCTTATAGAAAAATCAGAGTTGGAATCATTGGATATTTTATCGCGGTTTTTAAATTCTGGTCATTCAGATGAAGCTTTTGTTGTTGATGTTGTAATAAGCTTTATTCTTGCAGGAAGAGATACAACTTCAGCTGCACTCACTTGGTTCTTTTGGTTACTCTCTAAGCATAATCACGCGGAGAATGAGATTCTCAAAGAGGTTATGGGAAAATCAGAAACAGTTAGTTATGATGAGGTGAAAGATATGGTTTACACTCATGCGTCGTTATGTGAGAGTATGAGATTGTACCCTCCAGTTCCGGTGGATACTAAAGAAGCAGCGTACGATGATGTTTTGCCAAATGGAACATTAGTGAAGAAAGGGTGGAGACTGACATATCATATATATGCTATGGGAAGGTCTGAGAAGATATGGGGATCTGATTGGGCTGAGTTTCGACCCGAAAGGTGGTTGAGTCGGGATGAGGATGGGAAGTGGATCTTTGTTGGGATGGATCTTTATAGTTATCCAATTTTTCAGGCTGGGCCGAGGGTGTGTATAGGAAAGGAAATGGCGTTCCTGCAGATGAAGAGGGTGGTTGCCGCGATTATGAGACAATTCAGGGTGGTTCCGGCGATGGTTGAAGGGGTTGAGCCGGAGTACACTGCGTATCTTACCTCTTTAATGAAAGGTGGTTTCCCTGTAAAGATTGAGAAGCGTAGTCATACATATGAATAA 825 0.4218 MESEEILNIGTERRLKEAVAEVRGLATRIVREKKKELIEKSELESLDILSRFLNSGHSDEAFVVDVVISFILAGRDTTSAALTWFFWLLSKHNHAENEILKEVMGKSETVSYDEVKDMVYTHASLCESMRLYPPVPVDTKEAAYDDVLPNGTLVKKGWRLTYHIYAMGRSEKIWGSDWAEFRPERWLSRDEDGKWIFVGMDLYSYPIFQAGPRVCIGKEMAFLQMKRVVAAIMRQFRVVPAMVEGVEPEYTAYLTSLMKGGFPVKIEKRSHTYE 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02916 274 PRINTS E-class P450 group I signature 62 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 PRINTS E-class P450 group I signature 122 140 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 PRINTS E-class P450 group I signature 205 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 PRINTS E-class P450 group I signature 82 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 PRINTS E-class P450 group I signature 215 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 Gene3D Cytochrome P450 5 260 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 PRINTS P450 superfamily signature 215 226 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 PRINTS P450 superfamily signature 73 90 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 PRINTS P450 superfamily signature 123 134 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 PRINTS P450 superfamily signature 206 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 Pfam Cytochrome P450 11 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre2g02916 274 PANTHER CYTOCHROME P450 4 264 - -
Trre2g02916 274 SUPERFAMILY Cytochrome P450 9 269 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02916 Trre-Chr2 25744633 25745457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02916 2 271 Cytochrome P450 AT3G48520 50.549 2.84e-88 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02916 K20769 K20768 ag:AAG33645 454.136