Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02907 ATGAATGAAAGGAACAGAAATTTTTTTTGCTGCTTATTGAGCTGGGTCAGAGTAGGTTGCTTTTCTGAGATTTCTCCAGAAACATTGGCAGCTCACCCACTTCTAAATTTTGTATTTAACTCATTGCAGGGGTGTGATGCATCGGTACTTCTTGATTCTGCTCCCTCAAACACTGCAGAGAAAGACTCTCCCGCCAATAAACCAAGTCTTAGAGGGTTTGAAGTTATTGATAATGCCAAGGCTAAACTTGAAGATGTATGCAAAGGAACTGTTTCATGTGCTGACATAGTTGCATTTGCAGCAAGGGACAATGTGGAGTTAGAGCACACACCATTGGATGCTCTCATTGCGCTGCTTTCAGCAGCAGATTATACAACTTCAGCACCACATCAAGCCAGGATCCTAGATTCTACATCATTTGATCTTGCCATTGAAGTTCTTGTTGAACTTGTGACTAAACACGAGATCTTGAAGGCATGTTAA 483 0.4141 MNERNRNFFCCLLSWVRVGCFSEISPETLAAHPLLNFVFNSLQGCDASVLLDSAPSNTAEKDSPANKPSLRGFEVIDNAKAKLEDVCKGTVSCADIVAFAARDNVELEHTPLDALIALLSAADYTTSAPHQARILDSTSFDLAIEVLVELVTKHEILKAC 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02907 160 PANTHER PEROXIDASE 25-RELATED 34 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02907 160 PRINTS Plant peroxidase signature 71 84 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02907 160 PRINTS Plant peroxidase signature 31 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02907 160 PRINTS Plant peroxidase signature 90 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trre2g02907 160 ProSiteProfiles Plant heme peroxidase family profile. 25 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g02907 160 SUPERFAMILY Heme-dependent peroxidases 7 117 IPR010255 GO:0004601|GO:0006979|GO:0020037
Trre2g02907 160 Pfam Peroxidase 37 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trre2g02907 160 Gene3D - 12 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02907 Trre-Chr2 25577464 25579460 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02907 28 111 Peroxidase AT4G33420 60.465 2.77e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02907 K00430 - mnt:21386166 115.931