Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02874 ATGAGTACTATGTTGCATCAACTACTAAGAAGCCTTTGTTTTGAGACTGATTGGAAGTATGCTATCTTTTGGAAGCTAAAACAACACTGTGCTAAGATGATCTTGACATGGGAGGAAGCTTACTATGACAATCCTAATAATTGTGATTCTTCCCAAAGTGGTGGCGATTTTTCACACGACCCTCTAGGATTATCTGTGGCAAAGATGTCGAATCATGCATATTTGTTAGGGGAAGGTATTGTTGGACAAGTTGCTGTTACTGGAACACATCAGTGGATCTGTGCAGATAATCAAGTTACAAGTTCCGGCTCATCTTTTAAGTTTGCTGATGGATGGCAATCTCAGTTTTCTGCTGGCATTAGGACAATTGCTGTTGTAGCCATAGTTCCACTCGGAGTTGTTCAACTTGGCTCTTTAAATAAAGTTAGTGAAGACATGAGGGTTGTAACTCATATCAGAAGTCTCTTTTTGTCGTCTCATGATCACACATTAGGTTATCTTCCTAGTCAAATCCAAAATGTGAAACAAACCACACAGAAAACCACGACGTGCAAAACACCGGAAATGTTAATGCCCTTCCAATGTCCTCCGAATAACTATTCACCTCCTGCTGTTTATCAGAAAATGACTGTTGATGTGGCCAAGCATGGAGGGCTTGAAATTAACTGTCATCAAAGTTCCATCTTGCTTCAGTCGATGTCAAATATGATGACTGCAGAGAATCAGAAACTAGTAGGGACGAAGCCTACAAATGAAAGGAAGTGTGAAGGGAACAATAAAAGCTGCAAAGATATTAGTTTGAAATCAGACAAAAACATCTCATCGTTATTGCCCGATTCAGTTACAATAAGTCAATCAGAAAACGTCAGAGCTGATACAGAGATGTTAATGTTTCAGAGCATGTCTTGTTATGAGGATACCTCGTACACGTTGAAGTTCCCTGCTGGCTATGAGCTACACGAAGCACTTGGACCAGATTTTCTGAAAGAGAGTAAATATTATGATTGGGCAGTACCAGAAAATCAACAAGATAATAAACCTGCTGAGATGTCGGATGAAATTAGCTGCAGTCAATTGACAACTGAATCTCGTCCGGAGCATCTTTTGGAAGCAGTGGTGAGCAAAGTTTGCCATAGTAATAATAATATGGTTGATAACGAGTTATCATATTCTACATCAGTGCAGGATTCAATGGCCTCTGGAAGAAATCCTGGAGTTTCTATTCATACTGTCCGCACTATTAATTCCGAAGGCTATTCAACTGACCAACCATCTCATGTTAAAGAGGACAAGCATCATAGTTTGAGTTCATCAGGAATATGCGGTCTAATATCCCCTAAAAGTTTTTCTTCAACGTGTCCTAGTTCGTGTAGTAACCAGTTTGAGAGGTCTTCTTCTGAACCGTCTAAAAACATCAAAAAGAGGGCAAGGCCCGGGGAAAGTTGTAGGCCTAGACCAAGAGACAGACAGCTGATCCAAGACCGTATTAAGGAGTTACGAGAACTTGTGCCAAATGGAGCAAAGTGCAGTATTGATTCCCTGTTGGAGTGCACAATAAAGCATATGCTCTTTCTCCAAAGCATAACTAAGCATGCTGACAAGCTAAATAAATTTGCTGAAACAAAGACAAAGTCGTGTGATCACATGGATAAAGACATTCATGGATCCTCTGGTTATCGACAGGGTTCAAGTTGGGCGATGGAAGTAGGAGGACATCTGAAAGTTCATTCGATATTAGTAGAAAGTCTTGGTAAGAATGGACAGATGCTTGTTGAGATGCTTTGTGAGGAGTGCAACCATTTTCTTGAGATAGCAGAAGCCATAAGAAGCTTGGGATTGACGATTTTGAAAGGTGCAACTGAACCTCGTGGAGAGAAGACATGCATATGGTTTACTGTTGAGGGACAAAACAACATAAATTTACATAGGCTGGATATCTTGTGGCCGCTTGTTCAATTATTGCAGTCCAAGAGCACAGTGCATTCATGA 1989 0.4052 MSTMLHQLLRSLCFETDWKYAIFWKLKQHCAKMILTWEEAYYDNPNNCDSSQSGGDFSHDPLGLSVAKMSNHAYLLGEGIVGQVAVTGTHQWICADNQVTSSGSSFKFADGWQSQFSAGIRTIAVVAIVPLGVVQLGSLNKVSEDMRVVTHIRSLFLSSHDHTLGYLPSQIQNVKQTTQKTTTCKTPEMLMPFQCPPNNYSPPAVYQKMTVDVAKHGGLEINCHQSSILLQSMSNMMTAENQKLVGTKPTNERKCEGNNKSCKDISLKSDKNISSLLPDSVTISQSENVRADTEMLMFQSMSCYEDTSYTLKFPAGYELHEALGPDFLKESKYYDWAVPENQQDNKPAEMSDEISCSQLTTESRPEHLLEAVVSKVCHSNNNMVDNELSYSTSVQDSMASGRNPGVSIHTVRTINSEGYSTDQPSHVKEDKHHSLSSSGICGLISPKSFSSTCPSSCSNQFERSSSEPSKNIKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLECTIKHMLFLQSITKHADKLNKFAETKTKSCDHMDKDIHGSSGYRQGSSWAMEVGGHLKVHSILVESLGKNGQMLVEMLCEECNHFLEIAEAIRSLGLTILKGATEPRGEKTCIWFTVEGQNNINLHRLDILWPLVQLLQSKSTVHS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02874 662 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 476 525 IPR011598 GO:0046983
Trre2g02874 662 MobiDBLite consensus disorder prediction 457 486 - -
Trre2g02874 662 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 245 660 IPR043561 GO:0003700|GO:0006355
Trre2g02874 662 MobiDBLite consensus disorder prediction 467 486 - -
Trre2g02874 662 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 156 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02874 Trre-Chr2 25248045 25252945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02874 1 658 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 37.895 1.50e-130 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02874 - - cam:101504684 984.556