Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02873 ATGGGAAAACCTTTCGCTATCTTCAGCCACAGAGCAATCAAATACTCAAAACTTTATTTGTTCAAAGGTGTTCCAAAAGGGTTTTTGGCAGTAAAAGTTGGTTTAGGAGAAAAACAACAAAGGTTTGTTGTTCCTGTCTTGTACTTCAATCATCCTCTTTTGATTCAACTGTGGAAAGAGTCAGTAGAAGAAGAATATGGATTTGATCCAAAAGGAACAATTACTATTCATTGTCATGTTGAAGAATTCAAAAGCGTTTATAATTTGATTGATAGAAACAAGATTCGTTGTCACAAGAATCGTCGTCAACATGTTAGTTGTTTTGGTTTATGA 333 0.3393 MGKPFAIFSHRAIKYSKLYLFKGVPKGFLAVKVGLGEKQQRFVVPVLYFNHPLLIQLWKESVEEEYGFDPKGTITIHCHVEEFKSVYNLIDRNKIRCHKNRRQHVSCFGL 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02873 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 17 85 IPR003676 GO:0009733
Trre2g02873 110 Pfam Auxin responsive protein 23 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02873 Trre-Chr2 25174714 25175046 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02873 24 100 Calmodulin-binding Proteins AT5G20810 41.558 7.70e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02873 K14488 - gmx:100796789 127.102