Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02872 ATGTATATCACTTTTTGGAAATCTCATCCAGAGGGTGATGAAATTCCAGAGGAAATACTGCCTGAGCCTTTCAGTCGTCCAAAGCACGATCCTCTTTTACACATGTTGAAAACCCCCTCTTCATTGTCTACAGTGACATTATCTGATGGATGTGCTTCTCATCCTTCTACAATGTTGTCAACAAGTGTCATTGCAGATAATACAGACCCTGCTAACACAGAACTGAGACATCAGTTGAAGCTTTTAACCAGAAGCCAGCAGTTGCCTCTCATATGCCTCAATCTTTCAGAAGACGAGTCAAGTTTGAAGATAAGTTCCACCTCTGAGGTTGCTAATTCCCATCAGAAACCATCCTCATCTGAGTTGAGTTCAGTATCATCCAGTAGTGAAGCATGTCGTACAATTCATGGTTCTTCAGATTGCTTCACACCAGCCGGTGTCACACCAGCTACACCTAGCAAACCCGTTGAGTATACAGAAAGCAAAGATGGCTCCATGAAAAGCATTGAACCTTTGTCGACTCCAGCTAGATTTGTGTCTACTCCAGCCAGACTGATGACAGCCACACCTGCATTGAAGCCTCCTAAAAGGCATTTTATGAGCCCGGATGACAACTCTACCAGCTCACCAGACAAATTGGTTAAGCGCCCACCTAGTTCAAGGTCATTGAAATTTAACACTCCAATGAAAAATGAAAATGCTGCTCACGGTTTGTCAAGTGGTGATGACATTTTAGATATCCTCCCGGATTATCTTCTCCATTCGATTAGGGAAAAAGAAAGAATAGCAATGGAGGAAAGGGATCCAGCTATCTCCCAAGCTAAGAAACGGAAAAAAATTATTGCGAGCCTCCCTAAGCTCTTTAACATGATTGACATGATGTTTCATTCAAAGAACCGTTCTGTTATGACCAAAGAGGAGCTGATGAGCAATATAGTTTCAAACCACCGCGATATCATTGATAGAAGTGAAGTTGAAGAACAATTGCATTTGTTGTTAGAATTTGTTCACGTATGTAAACACAGATGA 1029 0.4179 MYITFWKSHPEGDEIPEEILPEPFSRPKHDPLLHMLKTPSSLSTVTLSDGCASHPSTMLSTSVIADNTDPANTELRHQLKLLTRSQQLPLICLNLSEDESSLKISSTSEVANSHQKPSSSELSSVSSSSEACRTIHGSSDCFTPAGVTPATPSKPVEYTESKDGSMKSIEPLSTPARFVSTPARLMTATPALKPPKRHFMSPDDNSTSSPDKLVKRPPSSRSLKFNTPMKNENAAHGLSSGDDILDILPDYLLHSIREKERIAMEERDPAISQAKKRKKIIASLPKLFNMIDMMFHSKNRSVMTKEELMSNIVSNHRDIIDRSEVEEQLHLLLEFVHVCKHR 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02872 342 MobiDBLite consensus disorder prediction 201 234 - -
Trre2g02872 342 Pfam DNA replication factor Cdt1 C-terminal domain 252 335 IPR032054 -
Trre2g02872 342 MobiDBLite consensus disorder prediction 106 239 - -
Trre2g02872 342 CDD Cdt1_c 242 336 IPR032054 -
Trre2g02872 342 PANTHER DNA REPLICATION FACTOR CDT1 4 336 IPR045173 GO:0003677|GO:0030174|GO:0071163
Trre2g02872 342 MobiDBLite consensus disorder prediction 106 136 - -
Trre2g02872 342 Gene3D - 240 338 IPR038090 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02872 Trre-Chr2 25162021 25163820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02872 5 336 Core DNA Replication Machinery Family AT2G31270 36.571 4.52e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02872 K10727 - gmx:100778818 266.929