Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre2g02862 ATGGAAGAGGAAAGTTCAAAGGAGAAGAATGACAAACAAGAATCACCAAAAGAAATTCGATACCGAGGAGTGAGGCGACGTCCATGGGGAAAATATGCGGCCGAGATTCGTGACCCAGCTCGGAAAGGTGCCCGTGTGTGGCTAGGGACATTCCTCACCGCGGAAGAAGCTGCGAGAGCTTATGATCGTGCCGCCTTTGAAATGAGAGGTGCTTTAGCCATTCTCAATTTTCCACATGAGTATCCATTTCTCAACACCTCTTCATCATCATCATCATTAGCACCTAATCCACATTCATCTTCTAGCTCTGAATCATTATTGCCTTCAAATTACCATAATGAGGATAGAAAACAAGTGTTTGAGTTTGAATGTTTGGATGATAAATTGTTAGAGGAATTTCTTGATTGTGATGAGAGTGAAACTACAACTCACAAAAACTTGCCAAAGTAG 450 0.4222 MEEESSKEKNDKQESPKEIRYRGVRRRPWGKYAAEIRDPARKGARVWLGTFLTAEEAARAYDRAAFEMRGALAILNFPHEYPFLNTSSSSSSLAPNPHSSSSSESLLPSNYHNEDRKQVFEFECLDDKLLEEFLDCDESETTTHKNLPK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre2g02862 149 MobiDBLite consensus disorder prediction 86 110 - -
Trre2g02862 149 PANTHER DNA-BINDING DOMAIN 6 139 IPR044808 GO:0003700|GO:0009873
Trre2g02862 149 MobiDBLite consensus disorder prediction 86 109 - -
Trre2g02862 149 SUPERFAMILY DNA-binding domain 20 80 IPR016177 GO:0003677
Trre2g02862 149 SMART rav1_2 20 84 IPR001471 GO:0003700|GO:0006355
Trre2g02862 149 MobiDBLite consensus disorder prediction 1 22 - -
Trre2g02862 149 Pfam AP2 domain 20 70 IPR001471 GO:0003700|GO:0006355
Trre2g02862 149 CDD AP2 20 79 IPR001471 GO:0003700|GO:0006355
Trre2g02862 149 FunFam Ethylene-responsive transcription factor 2 20 79 - -
Trre2g02862 149 Gene3D AP2/ERF domain 19 79 IPR036955 GO:0003700|GO:0006355
Trre2g02862 149 ProSiteProfiles AP2/ERF domain profile. 20 78 IPR001471 GO:0003700|GO:0006355
Trre2g02862 149 PRINTS Ethylene responsive element binding protein signature 21 32 IPR001471 GO:0003700|GO:0006355
Trre2g02862 149 PRINTS Ethylene responsive element binding protein signature 44 60 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre2g02862 Trre-Chr2 25075220 25075669 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre2g02862 17 138 AP2-EREBP Transcription Factor Family AT3G23230 61.789 1.01e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Trre2g02862 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre2g02862 - - gmx:100810414 168.318